Factsheet for HORVU3Hr1G004680.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G022470.1	Barley	cytosol, plastid	11.06	94.23
KRH55005	Soybean	cytosol, plasma membrane	19.19	92.39
HORVU6Hr1G037020.1	Barley	plastid	43.79	88.18
PGSC0003DMT400013730	Potato	plastid	45.37	87.01
Solyc12g033040.1.1	Tomato	cytosol	34.76	83.24
Zm00001d000272_P001	Maize	plastid	97.74	77.74
CDY67706	Canola	plasma membrane, vacuole	95.94	73.15
Bra041122.1-P	Field mustard	cytosol, vacuole	89.39	72.53
AGP50755	Barley	plastid	98.65	58.27
HORVU6Hr1G049200.2	Barley	cytosol, plasma membrane, plastid	98.65	58.27
HORVU5Hr1G064640.2	Barley	cytosol, plasma membrane, plastid	97.74	57.73
TraesCS5D01G010900.1	Wheat	plastid	97.52	57.6
TraesCS3B01G185500.1	Wheat	plastid	97.52	57.6
CAA33996	Rice	plasma membrane	97.29	57.47
CDY29455	Canola	cytosol, plasma membrane, plastid	95.94	56.67
CDX80066	Canola	cytosol, plasma membrane, plastid	95.94	56.67
CDY15767	Canola	cytosol, plasma membrane, plastid	95.94	56.67
CDX99951	Canola	cytosol, plasma membrane, plastid	95.94	56.67
HORVU4Hr1G045310.1	Barley	extracellular	33.41	40.66
HORVU0Hr1G029730.1	Barley	endoplasmic reticulum	11.51	39.53
HORVU1Hr1G038010.4	Barley	plastid	32.51	33.1
HORVU5Hr1G064630.2	Barley	plastid	33.63	32.04
HORVU4Hr1G045260.1	Barley	cytosol	9.71	31.39
AGP50754	Barley	plastid	38.37	23.16
HORVU6Hr1G049190.1	Barley	golgi, mitochondrion, peroxisome, plasma membrane	38.37	23.16
HORVU3Hr1G004700.1	Barley	plastid	22.35	21.85
HORVU4Hr1G045300.1	Barley	cytosol	20.99	16.58
CDY67707	Canola	cytosol	0.0	0.0
HORVU0Hr1G034550.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1130.10	MapMan:35.1	UniProt:A0A287JZM5	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009522	GO:GO:0009579
GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0046872	EnsemblPlantsGene:HORVU3Hr1G004680
EnsemblPlants:HORVU3Hr1G004680.1	InterPro:IPR036408	PFAM:PF00223	PRINTS:PR00257	ScanProsite:PS00419	InterPro:PSI_PsaA
InterPro:PSI_PsaA/B	InterPro:PSI_PsaA/B_CS	InterPro:PSI_PsaA/B_sf	PANTHER:PTHR30128	PANTHER:PTHR30128:SF8	SUPFAM:SSF81558
TIGRFAMs:TIGR01335	TMHMM:TMhelix	UniParc:UPI000B471F1C	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:+:11853383..11858162

Molecular Weight (calculated)

48865.2 Da

IEP (calculated)

8.585

GRAVY (calculated)

0.341

Length

443 amino acids

Sequence
(BLAST)

001: MYRTNWGIGH GLKDILEAHK GPFTGQGHKG LYEILTTSCH AQLSLNLAML GSTTIVVAHH MYSMPPYPYL ATDYGTQLSL FTHHMWIGGF LIVGAAAHAA
101: IFMVRDYDPT TRYNDLLDRV LRHRDAIISH LNWVCIFLGF YSFGLYIHND TMSALGRPQD MFSDTAIQLQ PIFAQWVQNI HATAPGVTAP GATTSTSLTW
201: GGGELVAVGG KVALLPIPLG TADFLVHHIH AFTIHVTVLI LLKGVLFARS SRLIPDKANL GFRFPCDGPG RGGTCQVSAW DHVFLGLFWM YNAISVVIFH
301: FSWKMQSDVW GTISDQGVVT HITGGNFAQS SITINGWLRD FLWAQASQVI QSYGSSLSAY GIFFLGAHFV WAFSLMFLFS GRGYWQELIE SIVWAHNKFK
401: VAPATQPRAL SIIQGRAVGV THYLLGGIAT TWAFFLARII AVG

Best Arabidopsis Sequence Match ( ATCG00350.1 )
(BLAST)

001: MIIRSPEPEV KILVDRDPIK TSFEEWAKPG HFSRTIAKGP DTTTWIWNLH ADAHDFDSHT SDLEEISRKV FSAHFGQLSI IFLWLSGMYF HGARFSNYEA
101: WLSDPTHIGP SAQVVWPIVG QEILNGDVGG GFRGIQITSG FFQIWRASGI TSELQLYCTA IGALVFAALM LFAGWFHYHK AAPKLAWFQD VESMLNHHLA
201: GLLGLGSLSW AGHQVHVSLP INQFLNAGVD PKEIPLPHEF ILNRDLLAQL YPSFAEGATP FFTLNWSKYS EFLTFRGGLD PVTGGLWLTD IAHHHLAIAI
301: LFLIAGHMYR TNWGIGHGIK DILEAHKGPF TGQGHKGLYE ILTTSWHAQL SLNLAMLGSL TIIVAHHMYS MPPYPYLATD YATQLSLFTH HMWIGGFLIV
401: GAAAHAAIFM VRDYDPTNRY NDLLDRVLRH RDAIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPVF AQWIQNTHAL APGVTAPGET
501: ASTSLTWGGG ELVAVGGKVA LLPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA
601: ISVVIFHFSW KMQSDVWGSI SDQGVVTHIT GGNFAQSSIT INGWLRDFLW AQASQVIQSY GSSLSAYGLF FLGAHFVWAF SLMFLFSGRG YWQELIESIV
701: WAHNKLKVAP ATQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIIAVG

Arabidopsis Description

PSAAPhotosystem I P700 chlorophyll a apoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:P56766]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.