Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 2
- extracellular 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G234800.1 | Wheat | cytosol, plasma membrane, plastid | 78.28 | 94.36 |
| TraesCS1B01G189100.1 | Wheat | cytosol, plasma membrane, plastid | 26.09 | 92.51 |
| KRH55005 | Soybean | cytosol, plasma membrane | 12.52 | 90.22 |
| TraesCS1B01G163800.1 | Wheat | cytosol, plasma membrane, plastid | 74.36 | 89.8 |
| TraesCS1B01G163900.1 | Wheat | cytosol, plasma membrane, plastid | 74.36 | 89.8 |
| PGSC0003DMT400013730 | Potato | plastid | 29.41 | 84.42 |
| TraesCS3B01G185500.1 | Wheat | plastid | 95.02 | 84.0 |
| Solyc12g033040.1.1 | Tomato | cytosol | 22.62 | 81.08 |
| TraesCS2B01G487400.1 | Wheat | plastid | 35.44 | 32.02 |
Protein Annotations
| MapMan:1.1.4.2.1 | Gene3D:1.20.1130.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009522 | GO:GO:0009579 | GO:GO:0009987 |
| GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 | InterPro:IPR036408 | PFAM:PF00223 |
| PRINTS:PR00257 | ScanProsite:PS00419 | InterPro:PSI_PsaA | InterPro:PSI_PsaA/B | InterPro:PSI_PsaA/B_CS | InterPro:PSI_PsaA/B_sf |
| PANTHER:PTHR30128 | PANTHER:PTHR30128:SF8 | SUPFAM:SSF81558 | TIGRFAMs:TIGR01335 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6B01G208100 |
| EnsemblPlants:TraesCS6B01G208100.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:267064802..267066793
Molecular Weight (calculated)
73585.2 Da
IEP (calculated)
7.757
GRAVY (calculated)
0.315
Length
663 amino acids
Sequence
(BLAST)
(BLAST)
001: MYFHGARFFN YEAWLSDPTH TGPSAQVVWP IVGQEILNGD VGGGFRGIQI TSGFFQLWRA SGITSELQLY CTAIVALIFV ALMLFAGWFH YHKASPKLDW
101: FQDVESMLNH HLAGLLGLGS LSWAGHQIHV SLPINQFLDA GVDPKEIPLP HEFILNRDLL AQLYPSFAEG ATPFFTLNWS KYAEFLTFRG GLDPVTGGLW
201: LTDIAHHHLA IAILFLIAGH MYRTNWGIGH GLKYILEAHK GPFTGQGHKG LYEILTTSWH AQLSLNLAML GSTTIVVAHH MYYMPPYPCL ATDYGTQLSL
301: FTHHMWIGGF LIVGAAAHAA IFMVRDYDPT TRYNDLLDRV LRHRDAIISH LNWVCIFLGF HSFGLYIHND TMSTLGRPQD MFSVTTIQLQ PIFAQWVQNI
401: HATAPGVTAP GATTSTSLTW GGDKIVAVGG KVALLPIPLG TADFLVHHIH AFTIHVTVLI LLKGVLFARS SRLIPDKANL GFRFPCDGPG RGGTCQVSAW
501: DHVFLGLFSM YNAISVVIFH FSWKMQSDVW GTISDQGVVT HITGGNFAQN SITINGWHRD FLWAQALQVI QSYGSSLSAY GLFFLGAHFV WSFSLMFLFS
601: GRGYWQELIE SIIWAHKKLK VAPATQPRAL SIIQGRTVGV THYLLGGIAT PWAFFLARII AVG
101: FQDVESMLNH HLAGLLGLGS LSWAGHQIHV SLPINQFLDA GVDPKEIPLP HEFILNRDLL AQLYPSFAEG ATPFFTLNWS KYAEFLTFRG GLDPVTGGLW
201: LTDIAHHHLA IAILFLIAGH MYRTNWGIGH GLKYILEAHK GPFTGQGHKG LYEILTTSWH AQLSLNLAML GSTTIVVAHH MYYMPPYPCL ATDYGTQLSL
301: FTHHMWIGGF LIVGAAAHAA IFMVRDYDPT TRYNDLLDRV LRHRDAIISH LNWVCIFLGF HSFGLYIHND TMSTLGRPQD MFSVTTIQLQ PIFAQWVQNI
401: HATAPGVTAP GATTSTSLTW GGDKIVAVGG KVALLPIPLG TADFLVHHIH AFTIHVTVLI LLKGVLFARS SRLIPDKANL GFRFPCDGPG RGGTCQVSAW
501: DHVFLGLFSM YNAISVVIFH FSWKMQSDVW GTISDQGVVT HITGGNFAQN SITINGWHRD FLWAQALQVI QSYGSSLSAY GLFFLGAHFV WSFSLMFLFS
601: GRGYWQELIE SIIWAHKKLK VAPATQPRAL SIIQGRTVGV THYLLGGIAT PWAFFLARII AVG
001: MIIRSPEPEV KILVDRDPIK TSFEEWAKPG HFSRTIAKGP DTTTWIWNLH ADAHDFDSHT SDLEEISRKV FSAHFGQLSI IFLWLSGMYF HGARFSNYEA
101: WLSDPTHIGP SAQVVWPIVG QEILNGDVGG GFRGIQITSG FFQIWRASGI TSELQLYCTA IGALVFAALM LFAGWFHYHK AAPKLAWFQD VESMLNHHLA
201: GLLGLGSLSW AGHQVHVSLP INQFLNAGVD PKEIPLPHEF ILNRDLLAQL YPSFAEGATP FFTLNWSKYS EFLTFRGGLD PVTGGLWLTD IAHHHLAIAI
301: LFLIAGHMYR TNWGIGHGIK DILEAHKGPF TGQGHKGLYE ILTTSWHAQL SLNLAMLGSL TIIVAHHMYS MPPYPYLATD YATQLSLFTH HMWIGGFLIV
401: GAAAHAAIFM VRDYDPTNRY NDLLDRVLRH RDAIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPVF AQWIQNTHAL APGVTAPGET
501: ASTSLTWGGG ELVAVGGKVA LLPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA
601: ISVVIFHFSW KMQSDVWGSI SDQGVVTHIT GGNFAQSSIT INGWLRDFLW AQASQVIQSY GSSLSAYGLF FLGAHFVWAF SLMFLFSGRG YWQELIESIV
701: WAHNKLKVAP ATQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIIAVG
101: WLSDPTHIGP SAQVVWPIVG QEILNGDVGG GFRGIQITSG FFQIWRASGI TSELQLYCTA IGALVFAALM LFAGWFHYHK AAPKLAWFQD VESMLNHHLA
201: GLLGLGSLSW AGHQVHVSLP INQFLNAGVD PKEIPLPHEF ILNRDLLAQL YPSFAEGATP FFTLNWSKYS EFLTFRGGLD PVTGGLWLTD IAHHHLAIAI
301: LFLIAGHMYR TNWGIGHGIK DILEAHKGPF TGQGHKGLYE ILTTSWHAQL SLNLAMLGSL TIIVAHHMYS MPPYPYLATD YATQLSLFTH HMWIGGFLIV
401: GAAAHAAIFM VRDYDPTNRY NDLLDRVLRH RDAIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPVF AQWIQNTHAL APGVTAPGET
501: ASTSLTWGGG ELVAVGGKVA LLPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA
601: ISVVIFHFSW KMQSDVWGSI SDQGVVTHIT GGNFAQSSIT INGWLRDFLW AQASQVIQSY GSSLSAYGLF FLGAHFVWAF SLMFLFSGRG YWQELIESIV
701: WAHNKLKVAP ATQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIIAVG
Arabidopsis Description
PSAAPhotosystem I P700 chlorophyll a apoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:P56766]
SUBAcon: [cytosol,plasma membrane,plastid]
SUBAcon: [cytosol,plasma membrane,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.