Factsheet for TraesCS6A01G211700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g052740.1.1	Tomato	nucleus	63.97	64.44
Solyc01g018090.1.1	Tomato	mitochondrion	41.91	57.58
Solyc01g017310.1.1	Tomato	mitochondrion	20.59	37.84
KRH49261	Soybean	cytosol, mitochondrion	24.26	28.7
Solyc06g009940.1.1	Tomato	nucleus	10.29	19.44
Solyc12g033050.1.1	Tomato	plastid	20.59	14.14
KRH38575	Soybean	cytosol, plasma membrane, plastid	3.68	5.05
Solyc01g017330.1.1	Tomato	extracellular	0.0	0.0
Solyc01g017320.1.1	Tomato	cytosol, golgi, mitochondrion, plastid	0.0	0.0
Solyc09g015300.1.1	Tomato	cytosol	0.0	0.0
Solyc09g015320.1.1	Tomato	cytosol	0.0	0.0
Solyc09g015340.1.1	Tomato	golgi	0.0	0.0
Solyc09g018800.1.1	Tomato	cytosol	0.0	0.0
Solyc01g017300.1.1	Tomato	plastid	0.0	0.0
HORVU4Hr1G045260.1	Barley	cytosol	0.0	0.0
Solyc12g035740.1.1	Tomato	cytosol, mitochondrion, plastid	0.0	0.0
TraesCS1D01G171400.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1130.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009522	GO:GO:0009579	GO:GO:0009987
GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0046872	InterPro:IPR036408	PFAM:PF00223
PRINTS:PR00257	InterPro:PSI_PsaA	InterPro:PSI_PsaA/B	InterPro:PSI_PsaA/B_sf	PANTHER:PTHR30128	PANTHER:PTHR30128:SF8
SUPFAM:SSF81558	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G211700	EnsemblPlants:TraesCS6A01G211700.1	SEG:seg	:

Description

No Description!

Coordinates

chr6A:-:384796667..384797077

Molecular Weight (calculated)

14975.1 Da

IEP (calculated)

7.970

GRAVY (calculated)

0.367

Length

136 amino acids

Sequence
(BLAST)

001: MYFHGARFSN YEAWLSDPTH IGPGAQVVWP IVGQEILNGD VGGGFRGIQI TSGFFQLWRA SGITSELQLY YTAIGALIFA ALMLFAGWFH YHKAARKLAW
101: FQDVESMLNH HLAGLLGLGS LSWAGHQILA RIIAVG

Best Arabidopsis Sequence Match ( ATCG00350.1 )
(BLAST)

001: MIIRSPEPEV KILVDRDPIK TSFEEWAKPG HFSRTIAKGP DTTTWIWNLH ADAHDFDSHT SDLEEISRKV FSAHFGQLSI IFLWLSGMYF HGARFSNYEA
101: WLSDPTHIGP SAQVVWPIVG QEILNGDVGG GFRGIQITSG FFQIWRASGI TSELQLYCTA IGALVFAALM LFAGWFHYHK AAPKLAWFQD VESMLNHHLA
201: GLLGLGSLSW AGHQVHVSLP INQFLNAGVD PKEIPLPHEF ILNRDLLAQL YPSFAEGATP FFTLNWSKYS EFLTFRGGLD PVTGGLWLTD IAHHHLAIAI
301: LFLIAGHMYR TNWGIGHGIK DILEAHKGPF TGQGHKGLYE ILTTSWHAQL SLNLAMLGSL TIIVAHHMYS MPPYPYLATD YATQLSLFTH HMWIGGFLIV
401: GAAAHAAIFM VRDYDPTNRY NDLLDRVLRH RDAIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPVF AQWIQNTHAL APGVTAPGET
501: ASTSLTWGGG ELVAVGGKVA LLPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA
601: ISVVIFHFSW KMQSDVWGSI SDQGVVTHIT GGNFAQSSIT INGWLRDFLW AQASQVIQSY GSSLSAYGLF FLGAHFVWAF SLMFLFSGRG YWQELIESIV
701: WAHNKLKVAP ATQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIIAVG

Arabidopsis Description

PSAAPhotosystem I P700 chlorophyll a apoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:P56766]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.