Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g033040.1.1 | Tomato | cytosol | 49.28 | 36.76 |
| Solyc10g017900.1.1 | Tomato | extracellular, golgi, plasma membrane | 36.23 | 35.46 |
| HORVU4Hr1G045260.1 | Barley | cytosol | 21.01 | 21.17 |
| Solyc12g062600.1.1 | Tomato | cytosol, nucleus, plastid | 14.49 | 20.2 |
| Solyc12g032990.1.1 | Tomato | plastid | 23.19 | 17.68 |
| Solyc12g033060.1.1 | Tomato | plastid | 31.88 | 16.12 |
| Solyc07g021240.1.1 | Tomato | cytoskeleton, cytosol, plastid | 18.12 | 14.79 |
| Solyc05g020010.1.1 | Tomato | nucleus | 14.49 | 12.74 |
| Solyc12g035740.1.1 | Tomato | cytosol, mitochondrion, plastid | 5.8 | 5.41 |
| TraesCS1D01G171400.1 | Wheat | cytosol | 4.35 | 3.19 |
| Solyc10g017890.1.1 | Tomato | nucleus | 7.25 | 3.18 |
| Solyc12g033050.1.1 | Tomato | plastid | 3.62 | 2.53 |
| Solyc02g020960.1.1 | Tomato | plastid | 3.62 | 1.77 |
| Solyc09g059640.1.1 | Tomato | cytosol | 0.72 | 0.89 |
| Solyc12g032980.1.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc09g018800.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| TraesCS6A01G211700.1 | Wheat | plastid | 0.0 | 0.0 |
| Solyc10g052740.1.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc09g015340.1.1 | Tomato | golgi | 0.0 | 0.0 |
| Solyc09g015320.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc09g015300.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc06g009940.1.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc01g018090.1.1 | Tomato | mitochondrion | 0.0 | 0.0 |
| Solyc01g017320.1.1 | Tomato | cytosol, golgi, mitochondrion, plastid | 0.0 | 0.0 |
| Solyc01g017310.1.1 | Tomato | mitochondrion | 0.0 | 0.0 |
| Solyc01g017300.1.1 | Tomato | plastid | 0.0 | 0.0 |
| KRH49261 | Soybean | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1130.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009522 | GO:GO:0009579 | GO:GO:0009987 |
| GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 | InterPro:IPR036408 | UniProt:K4AUR4 |
| PFAM:PF00223 | InterPro:PSI_PsaA | InterPro:PSI_PsaA/B | InterPro:PSI_PsaA/B_sf | PANTHER:PTHR30128 | PANTHER:PTHR30128:SF8 |
| SUPFAM:SSF81558 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc01g017330.1 | EnsemblPlants:Solyc01g017330.1.1 | TMHMM:TMhelix | UniParc:UPI0002762931 |
Description
No Description!
Coordinates
chr1:+:23937055..23937561
Molecular Weight (calculated)
15043.5 Da
IEP (calculated)
8.514
GRAVY (calculated)
0.427
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MWIGGFLIVG AAAHAAIFMV RDYDPNTRFG LYIHNDTMSS LGRPQYMFPD TAIHTCLSTW CNNNLQFNLG GGDLVAMGGK VAFLPIPLGT ADLLVHHIHA
101: FTIHVTVLIF LKGILFARSS RLIPNKANLG FGFPCNGP
101: FTIHVTVLIF LKGILFARSS RLIPNKANLG FGFPCNGP
1: MRNNNYGNYN IVGTNGYRGI FFERQVDPNT DLGTFMPVDL SDRLNAAFCV FTAFVWT
Arabidopsis Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT3G49744]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.