Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66844 | Soybean | cytosol | 3.85 | 6.41 |
| KRH61614 | Soybean | endoplasmic reticulum | 29.23 | 6.39 |
| KRH48727 | Soybean | endoplasmic reticulum | 29.23 | 5.29 |
| KRH64883 | Soybean | endoplasmic reticulum | 29.23 | 5.29 |
| KRH50214 | Soybean | nucleus | 20.77 | 5.22 |
| KRH71216 | Soybean | nucleus | 20.77 | 5.21 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | UniProt:A0A0R0LJ67 | EMBL:ACUP02000539 | InterPro:EIF3B | EnsemblPlantsGene:GLYMA_01G122200 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005852 | GO:GO:0006412 |
| GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0031369 | InterPro:IPR012677 | EnsemblPlants:KRH75983 | ProteinID:KRH75983 | ProteinID:KRH75983.1 |
| InterPro:Nucleotide-bd_a/b_plait_sf | PANTHER:PTHR14068 | InterPro:RBD_domain_sf | SUPFAM:SSF54928 | UniParc:UPI0006ED8EB6 | : |
Description
hypothetical protein
Coordinates
chr1:+:42007444..42008724
Molecular Weight (calculated)
14751.8 Da
IEP (calculated)
4.960
GRAVY (calculated)
-0.449
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDVMVMKEI KDTALHLGVD LSTLDLDAIR LPPGEKCGIV RSLRSSKKWS LDGLWMPVDP ETEKTLGYYF IEYNTPQEAE LAKEKTHGMF DDFDRFMKVP
101: NEWAPPETKP YAPGKIFNTG SLMQRPGTSL
101: NEWAPPETKP YAPGKIFNTG SLMQRPGTSL
001: MEVVDIDARA AKLGIDWSQV NFDSIQLPPG EDFGIESDDE AVYQDDQSEF DTGFGNIIVV DHLPVVPKEK FEKLEGVVKK IYNQLGVIKE NGLWMPVDPD
101: TKMTLGYCFI EFNTPQEAQN AKEKSHGYKL DKSHIFAVNM FDDFDRLMNV KEEWEPPQAR PYVPGENLQK WLTDEKARDQ LVIRSGPDTE VFWNDTRQKA
201: PEPVHKRPYW TESYVQWSPL GTYLVTLHKQ GAAVWGGADT FTRLMRYQHS MVKLVDFSPG EKYLVTYHSQ EPSNPRDASK VEIKVFDVRT GRMMRDFKGS
301: ADEFSIGGPG GVAGASWPVF RWAGGKDDKY FAKLSKNTIS VYETETFSLI DKKSMKVDNV VDICWSPTDS ILSLFVPEQG GGNQPAKVAL VQIPSKVELR
401: QKNLFSVSDC KMYWQSSGEY LAVKVDRYTK TKKSTYSGFE LFRIKERDIP IEVLELDNKN DKIIAFAWEP KGHRFAVIHG DQPRPDVSFY SMKTAQNTGR
501: VSKLATLKAK QANALFWSPT GKYIILAGLK GFNGQLEFFN VDELETMATA EHFMATDIEW DPTGRYVATA VTSVHEMENG FTIWSFNGIM LYRILKDHFF
601: QLAWRPRPPS FLTAEKEEEI AKTLKKYSKK YEAEDQDVSL LLSEQDREKR KALKEEWEKW VMQWKSLHEE EKLVRQNLRD GEVSDVEEDE YEAKEVEFED
701: LIDVTEEIVQ ES
101: TKMTLGYCFI EFNTPQEAQN AKEKSHGYKL DKSHIFAVNM FDDFDRLMNV KEEWEPPQAR PYVPGENLQK WLTDEKARDQ LVIRSGPDTE VFWNDTRQKA
201: PEPVHKRPYW TESYVQWSPL GTYLVTLHKQ GAAVWGGADT FTRLMRYQHS MVKLVDFSPG EKYLVTYHSQ EPSNPRDASK VEIKVFDVRT GRMMRDFKGS
301: ADEFSIGGPG GVAGASWPVF RWAGGKDDKY FAKLSKNTIS VYETETFSLI DKKSMKVDNV VDICWSPTDS ILSLFVPEQG GGNQPAKVAL VQIPSKVELR
401: QKNLFSVSDC KMYWQSSGEY LAVKVDRYTK TKKSTYSGFE LFRIKERDIP IEVLELDNKN DKIIAFAWEP KGHRFAVIHG DQPRPDVSFY SMKTAQNTGR
501: VSKLATLKAK QANALFWSPT GKYIILAGLK GFNGQLEFFN VDELETMATA EHFMATDIEW DPTGRYVATA VTSVHEMENG FTIWSFNGIM LYRILKDHFF
601: QLAWRPRPPS FLTAEKEEEI AKTLKKYSKK YEAEDQDVSL LLSEQDREKR KALKEEWEKW VMQWKSLHEE EKLVRQNLRD GEVSDVEEDE YEAKEVEFED
701: LIDVTEEIVQ ES
Arabidopsis Description
TIF3B1Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/TrEMBL;Acc:F4K4D5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.