CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71216	Soybean	nucleus	88.2	88.03
KRH66844	Soybean	cytosol	11.03	73.08
GSMUA_Achr6P28750_001	Banana	nucleus	66.92	66.41
VIT_05s0094g00460.t01	Wine grape	nucleus	73.89	66.2
AT1G73180.1	Thale cress	cytosol	63.64	64.13
Solyc08g014060.2.1	Tomato	plastid	70.99	63.17
CDX68240	Canola	nucleus	62.28	62.77
Bra003854.1-P	Field mustard	nucleus	62.09	62.57
TraesCS6A01G216300.2	Wheat	nucleus	59.77	59.88
HORVU6Hr1G055460.11	Barley	nucleus, plastid	60.15	59.69
EES05393	Sorghum	nucleus	60.35	59.66
TraesCS6B01G246600.1	Wheat	plastid	59.96	59.5
Zm00001d017150_P001	Maize	nucleus	58.22	57.55
CDY11124	Canola	mitochondrion	60.35	55.03
TraesCS6D01G199300.3	Wheat	plastid	57.83	49.18
Os02t0606100-00	Rice	nucleus, plasma membrane	9.09	40.87
KRH75983	Soybean	cytosol	5.22	20.77
KRH64883	Soybean	endoplasmic reticulum	18.57	13.37
KRH48727	Soybean	endoplasmic reticulum	18.18	13.09
KRH61614	Soybean	endoplasmic reticulum	14.89	12.94

Protein Annotations

EntrezGene:100810278	MapMan:17.4.3.1	EMBL:ACUP02004670	ncoils:Coil	EnsemblPlantsGene:GLYMA_07G208200	GO:GO:0000049
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003729	GO:GO:0003743	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840
GO:GO:0006412	GO:GO:0006413	GO:GO:0006417	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022627	GO:GO:0043022	UniProt:I1KLV9
EnsemblPlants:KRH50214	ProteinID:KRH50214	ProteinID:KRH50214.1	PFAM:PF08662	PIRSF:PIRSF017222	PANTHER:PTHR13227
SUPFAM:SSF82171	InterPro:TIF2A	InterPro:TIF_beta_prop-like	UniParc:UPI0002338207	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:37790376..37796085

Molecular Weight (calculated)

56704.1 Da

IEP (calculated)

8.988

GRAVY (calculated)

-0.442

Length

517 amino acids

Sequence
(BLAST)

001: MASNSHSPSL EILVRGPEDF SLWTGPPFAN DQPSVKLEKV NCINAKFSDD GSNLMVTKSN SLISVYDCST AKEIRVFEVP NVVAAALSPK GTYLQTFQKP
101: SGPQEKNVTL WSIETGAAVY QQSQKNMTKA NWPAIQFSSD EATVCRLATN EVQFFDTGDF SKGVVCRLRV QGVAAAELSS LPGSHVAAFV PESKGIPASV
201: QIFACGNASQ SQPVARRSFF RCSTTQLKWN HGSTGLLVVV QSDVDKTNQS YYGESKLCYL TTDGMHEGLV PLRKDGPIHD AQWSYSGLEF AVVYGFMPAK
301: ATLFDKKCNP LLELGTGPYN TIRWNPKGKF LCLAGFGNLP GDMVFWDYID KKQLGATKAE WSVTSEWSPD GCYFMTATTA PRLQVDNGIK IFHYNGSLYF
401: KKMFDKLYQA DWKPESPSKF GDIAELIKSL NLVQLEDKKP SGQGPPKSTQ TSTKASSTNP PTQKPAAYRP PHAKNASAIQ AELFGETPAE PLSKNALRNK
501: KKREKQKEKK ASDASSS

Best Arabidopsis Sequence Match ( AT1G73180.1 )
(BLAST)

001: MSSSPSLEIL VREAEGFTVW NGPPFTNGQP TLKLERVSCS NTKFSVDGSK LMAMKSDGVI SIYDATSLTE VRSFTIANVT AAELSPCGTY LQTFQKPTTP
101: QEKNVSIWNT ETGDLAHSHY QKSITKASWP SIRFCPDESS ACRLATNEVQ FFDPKDFSKG ITSRIRVPGI AAFELSKTPA SHVAVFVPES KGSPGSVQIF
201: GCGEELQSQP SARRSFFRCS SVQFSWNHGS TGLLVVVQSD VDKTNQSYYG ETKLHYLTID GTHEGLVPLR KEGPVHDVQW SFSGSEFAVV YGFMPACVTI
301: FDKNCKPLME LGEGPYNTLR WNPKGRVLCV AGFGNLPGDM AFWDVVNKKQ LGSNKAEWSV TSEWSPDGRY FLTASTAPRR QIDNGMKIFN YDGKRYYKKM
401: FERLYQAEWK PESPERFGDI SELIKSVESL KLGEGKSQGQ GSAQKKTIAP NPIAQKPAAY RPPHAKHAAA VQAELLGIST TGEMSKNALK NKKKRENKKA
501: AAAAAAASGS NNA

Arabidopsis Description

Eukaryotic translation initiation factor 2A [Source:UniProtKB/TrEMBL;Acc:Q9CAT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.