Factsheet for Os02t0606100-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05393	Sorghum	nucleus	80.87	17.78
Zm00001d017150_P001	Maize	nucleus	80.0	17.59
HORVU6Hr1G055460.11	Barley	nucleus, plastid	65.22	14.4
TraesCS6A01G216300.2	Wheat	nucleus	64.35	14.34
TraesCS6B01G246600.1	Wheat	plastid	62.61	13.82
CDY66322	Canola	golgi, plastid	21.74	12.08
AT1G73180.1	Thale cress	cytosol	49.57	11.11
GSMUA_Achr6P28750_001	Banana	nucleus	49.57	10.94
TraesCS6D01G199300.3	Wheat	plastid	54.78	10.36
KRH71216	Soybean	nucleus	46.09	10.23
KRH50214	Soybean	nucleus	40.87	9.09
Bra003854.1-P	Field mustard	nucleus	39.13	8.77
VIT_05s0094g00460.t01	Wine grape	nucleus	43.48	8.67
Solyc08g014060.2.1	Tomato	plastid	40.0	7.92
Os10t0569200-01	Rice	cytosol, golgi, nucleus, plasma membrane, plastid	7.83	1.25

Protein Annotations

MapMan:35.2	UniProt:A0A0P0VLQ3	ProteinID:BAS79661.1	GO:GO:0000049	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003729	GO:GO:0003743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0006413
GO:GO:0006417	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	GO:GO:0022627	GO:GO:0043022	EnsemblPlantsGene:Os02g0606100	EnsemblPlants:Os02t0606100-00	UniParc:UPI0003938F7F
SEG:seg	:	:	:	:	:

Description

Similar to eukaryotic translation initiation factor-related. (Os02t0606100-00)

Coordinates

chr2:-:23749148..23750278

Molecular Weight (calculated)

12210.2 Da

IEP (calculated)

10.337

GRAVY (calculated)

-1.053

Length

115 amino acids

Sequence
(BLAST)

001: QADWKPEAPE KFSDIADLTI SLGSIKIEET KKQVSAQGSK SAQPSSKAPA NIAAKPTAYR PPHSKNSADV QDKLFGGLAS TGGEMSKNAL RNKKRREKQK
101: EKKAAEGSGA SADDN

Best Arabidopsis Sequence Match ( AT1G73180.1 )
(BLAST)

001: MSSSPSLEIL VREAEGFTVW NGPPFTNGQP TLKLERVSCS NTKFSVDGSK LMAMKSDGVI SIYDATSLTE VRSFTIANVT AAELSPCGTY LQTFQKPTTP
101: QEKNVSIWNT ETGDLAHSHY QKSITKASWP SIRFCPDESS ACRLATNEVQ FFDPKDFSKG ITSRIRVPGI AAFELSKTPA SHVAVFVPES KGSPGSVQIF
201: GCGEELQSQP SARRSFFRCS SVQFSWNHGS TGLLVVVQSD VDKTNQSYYG ETKLHYLTID GTHEGLVPLR KEGPVHDVQW SFSGSEFAVV YGFMPACVTI
301: FDKNCKPLME LGEGPYNTLR WNPKGRVLCV AGFGNLPGDM AFWDVVNKKQ LGSNKAEWSV TSEWSPDGRY FLTASTAPRR QIDNGMKIFN YDGKRYYKKM
401: FERLYQAEWK PESPERFGDI SELIKSVESL KLGEGKSQGQ GSAQKKTIAP NPIAQKPAAY RPPHAKHAAA VQAELLGIST TGEMSKNALK NKKKRENKKA
501: AAAAAAASGS NNA

Arabidopsis Description

Eukaryotic translation initiation factor 2A [Source:UniProtKB/TrEMBL;Acc:Q9CAT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.