Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99703 | Sorghum | cytosol | 97.71 | 97.71 |
| KXG29217 | Sorghum | cytosol | 92.48 | 93.09 |
| Zm00001d006871_P001 | Maize | cytosol, extracellular, plastid | 92.16 | 91.86 |
| Os07t0616600-02 | Rice | nucleus | 86.27 | 86.56 |
| TraesCS2A01G168300.1 | Wheat | cytosol, nucleus, plastid | 82.03 | 82.57 |
| TraesCS2B01G194400.1 | Wheat | cytosol, golgi, unclear | 82.03 | 82.57 |
| TraesCS2D01G175700.1 | Wheat | cytosol | 81.7 | 82.24 |
| OQU92440 | Sorghum | plastid | 28.76 | 48.09 |
Protein Annotations
| MapMan:17.1.3.1.1 | Gene3D:3.40.50.10490 | InterPro:40S_SA_C | UniProt:A0A1B6QFI8 | GO:GO:0000028 | GO:GO:0000447 |
| GO:GO:0000461 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006407 |
| GO:GO:0006412 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0015935 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0022627 | GO:GO:0030529 | GO:GO:0030686 |
| EnsemblPlants:KXG36688 | ProteinID:KXG36688 | ProteinID:KXG36688.1 | HAMAP:MF_03015 | PFAM:PF00318 | PFAM:PF16122 |
| PRINTS:PR00395 | ScanProsite:PS00963 | PANTHER:PTHR11489 | PANTHER:PTHR11489:SF15 | InterPro:Ribosomal_S2 | InterPro:Ribosomal_S2_CS |
| InterPro:Ribosomal_S2_euk | InterPro:Ribosomal_S2_euk/arc | InterPro:Ribosomal_S2_flav_dom_sf | EnsemblPlantsGene:SORBI_3002G374900 | SUPFAM:SSF52313 | TIGRFAMs:TIGR01012 |
| UniParc:UPI000220712C | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:73266725..73269413
Molecular Weight (calculated)
33011.0 Da
IEP (calculated)
4.706
GRAVY (calculated)
-0.223
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAPAGGAA RALSQREQDI QMMLAADVHL GTKNCDFQME RYVYKRRSDG IYIINLGKTW EKLQLAARVI VAIENPQDII VQSARPYGQR AVLKFAQYTG
101: AHAIAGRHTP GTFTNQLQTS FSEPRLLILT DPRTDHQPIK ESALGNIPTI AFCDTDSPMR YVDIGIPANN KGKQSIGCLF WLLARMVLQM RGTILPGHKW
201: DIMVDLFFYR DPEEAKEQEE EEALVAPDYG AVAEYTAPVG ENWGGADWGT GEAAAPPAGI PAAGADWASA PAPPADGVWD AAAAPPAATG WEESAAPVAA
301: PTPNWA
101: AHAIAGRHTP GTFTNQLQTS FSEPRLLILT DPRTDHQPIK ESALGNIPTI AFCDTDSPMR YVDIGIPANN KGKQSIGCLF WLLARMVLQM RGTILPGHKW
201: DIMVDLFFYR DPEEAKEQEE EEALVAPDYG AVAEYTAPVG ENWGGADWGT GEAAAPPAGI PAAGADWASA PAPPADGVWD AAAAPPAATG WEESAAPVAA
301: PTPNWA
001: MAANGVATAG RQVSEKEADI QMMLSADVHL GTKNCNYQME RYVFKRRDDG IYIINLGKTW DKLQMAARVI VAIENPKDII VQSARPYGQR AVLKFAQYTG
101: VNAIAGRHTP GTFTNQMQTS FSEPRLLILT DPRTDHQPIK EGALGNIPTI AFCDTDSPMG FVDIGIPANN KGKHSIGCLF WLLARMVLQM RGTILAAQKW
201: DVMVDLFFYR EPEEAKQEGD EEAEVQADYG MVGGDQWTTA QISDAAWSGE VEQPISAAPA VGVTVAAGWE AASVPAAGWE
101: VNAIAGRHTP GTFTNQMQTS FSEPRLLILT DPRTDHQPIK EGALGNIPTI AFCDTDSPMG FVDIGIPANN KGKHSIGCLF WLLARMVLQM RGTILAAQKW
201: DVMVDLFFYR EPEEAKQEGD EEAEVQADYG MVGGDQWTTA QISDAAWSGE VEQPISAAPA VGVTVAAGWE AASVPAAGWE
Arabidopsis Description
RPSAb40S ribosomal protein SA [Source:UniProtKB/TrEMBL;Acc:F4J4W3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.