Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- cytosol 2
- endoplasmic reticulum 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G171600.1 | Wheat | cytosol, mitochondrion | 77.22 | 81.7 |
| TraesCS4D01G173700.1 | Wheat | cytosol, mitochondrion | 76.37 | 80.8 |
| Os05t0169100-01 | Rice | nucleus, plastid | 70.04 | 75.8 |
| Os11t0220800-01 | Rice | nucleus | 70.04 | 74.11 |
| KXG39441 | Sorghum | mitochondrion | 75.53 | 55.08 |
Protein Annotations
| MapMan:17.1.2.1.9 | Gene3D:3.90.1170.10 | UniProt:A0A0P0VX44 | ProteinID:BAS84042.1 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| InterPro:IPR036920 | EnsemblPlantsGene:Os03g0332500 | EnsemblPlants:Os03t0332500-00 | PFAM:PF00252 | ScanProsite:PS01257 | PANTHER:PTHR11726 |
| PANTHER:PTHR11726:SF13 | InterPro:Ribosomal_L10e | InterPro:Ribosomal_L10e/L16 | InterPro:Ribosomal_L10e/L16_sf | InterPro:Ribosomal_L10e_CS | SUPFAM:SSF54686 |
| TIGRFAMs:TIGR00279 | UniParc:UPI000393A193 | : | : | : | : |
Description
Similar to QM protein. (Os03t0332500-00)
Coordinates
chr3:-:12270063..12270872
Molecular Weight (calculated)
26895.9 Da
IEP (calculated)
11.085
GRAVY (calculated)
-0.539
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: QRDRGRDRSI DIVRAGPVRC YRQIKNKPYP KSRYCRGVPD PKIRIFDVGQ KKRSADDFPL CVHLVSWEKE NVSSEALEAA RIACNKYMAK HAGKDAFHLR
101: VCAHPYHVLR INKMLSCAGA DRLQTGMRGA FGKPTGTCAR VRIGQVLLSV RCRDANAAHA QEALRRAKFK FPGRQRVIFS AKWGFTRFKR DEYLKLKSEG
201: RIVPDGVNAK VRTKPRCIAR NDKIITKLIN ACMVNSG
101: VCAHPYHVLR INKMLSCAGA DRLQTGMRGA FGKPTGTCAR VRIGQVLLSV RCRDANAAHA QEALRRAKFK FPGRQRVIFS AKWGFTRFKR DEYLKLKSEG
201: RIVPDGVNAK VRTKPRCIAR NDKIITKLIN ACMVNSG
001: MGRRPARCYR QIKGKPYPKS RYCRGVPDPK IRIYDVGMKR KGVDEFPYCV HLVSWEKENV SSEALEAARI ACNKYMVKSA GKDAFHLRIR VHPFHVLRIN
101: KMLSCAGADR LQTGMRGAFG KALGTCARVA IGQVLLSVRC KDAHGHHAQE ALRRAKFKFP GRQKIIVSRK WGFTKFNRAD YTKLRQEKRI VPDGVNAKFL
201: SCHGPLANRQ PGSAFLSAGA Q
101: KMLSCAGADR LQTGMRGAFG KALGTCARVA IGQVLLSVRC KDAHGHHAQE ALRRAKFKFP GRQKIIVSRK WGFTKFNRAD YTKLRQEKRI VPDGVNAKFL
201: SCHGPLANRQ PGSAFLSAGA Q
Arabidopsis Description
RPL10B60S ribosomal protein L10-2 [Source:UniProtKB/Swiss-Prot;Acc:Q08770]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.