Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 3
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003630_P001 | Maize | extracellular | 76.47 | 75.97 |
| Zm00001d025445_P001 | Maize | extracellular | 75.82 | 75.32 |
| OQU81612 | Sorghum | cytosol, nucleus, peroxisome | 75.16 | 74.68 |
| TraesCS2A01G306200.1 | Wheat | peroxisome | 71.9 | 73.83 |
| TraesCS2D01G304600.1 | Wheat | peroxisome | 71.9 | 73.83 |
| TraesCS2B01G322900.1 | Wheat | peroxisome | 70.59 | 72.48 |
| HORVU2Hr1G076160.3 | Barley | cytosol | 49.67 | 60.8 |
| Os01t0882100-00 | Rice | cytosol, peroxisome | 7.19 | 35.48 |
| Os01t0229500-01 | Rice | plastid | 29.41 | 26.95 |
| Os02t0521700-01 | Rice | cytosol | 23.53 | 19.78 |
| GSMUA_Achr10P... | Banana | peroxisome | 47.71 | 16.33 |
Protein Annotations
| Gene3D:3.10.129.10 | MapMan:35.2 | EntrezGene:4335905 | EMBL:AK072631 | ProteinID:BAF14765.1 | ProteinID:BAS89306.1 |
| ProteinID:CAD40812.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf | EnsemblPlantsGene:Os04g0436100 |
| EnsemblPlants:Os04t0436100-01 | InterPro:PAAI_dom | PFAM:PF03061 | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF15 | UniProt:Q7XV63 |
| SUPFAM:SSF54637 | TIGRFAMs:TIGR00369 | InterPro:Thioestr_dom | UniParc:UPI00001B1589 | RefSeq:XP_015635634.1 | : |
Description
Thioesterase superfamily domain containing protein. (Os04t0436100-01)
Coordinates
chr4:-:21695578..21698610
Molecular Weight (calculated)
15991.3 Da
IEP (calculated)
9.487
GRAVY (calculated)
0.213
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPEAVRRSL EPTALSKEVV GPASASLRYD AFALTGVRID AAEHGRLLCS FVVTPRIASP AGYLLSGVTA TLADQLGSGV FLSSGIGTSG VSLELNLSYV
101: DVASIGEEIE VEGKLLRAGK SVGVVSVDFR KKKTGKLIAQ ARHTKYLAVS SKL
101: DVASIGEEIE VEGKLLRAGK SVGVVSVDFR KKKTGKLIAQ ARHTKYLAVS SKL
001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
Arabidopsis Description
F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.