Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- peroxisome 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02196 | Sorghum | plastid | 74.85 | 76.69 |
| Zm00001d030077_P001 | Maize | peroxisome | 40.12 | 76.14 |
| Zm00001d008999_P001 | Maize | peroxisome, plastid | 71.26 | 73.46 |
| TraesCS3B01G181000.1 | Wheat | peroxisome | 70.06 | 70.48 |
| Zm00001d052281_P001 | Maize | peroxisome | 68.26 | 70.37 |
| Zm00001d006909_P001 | Maize | peroxisome | 68.26 | 70.37 |
| TraesCS3A01G154700.1 | Wheat | peroxisome | 68.86 | 70.12 |
| TraesCS3D01G162100.1 | Wheat | peroxisome | 68.86 | 69.28 |
| Zm00001d002652_P001 | Maize | peroxisome, plastid | 67.07 | 69.14 |
| Zm00001d005676_P002 | Maize | peroxisome | 69.46 | 62.7 |
| Os01t0882100-00 | Rice | cytosol, peroxisome | 8.98 | 48.39 |
| CDY70889 | Canola | cytosol, peroxisome | 11.38 | 32.76 |
| AT3G16175.1 | Thale cress | cytosol | 30.54 | 32.48 |
| CDY28372 | Canola | peroxisome | 29.34 | 31.01 |
| CDY20186 | Canola | cytosol | 29.34 | 31.01 |
| Bra021167.1-P | Field mustard | cytosol | 29.34 | 31.01 |
| KRH44334 | Soybean | peroxisome | 28.14 | 29.75 |
| CDX87876 | Canola | peroxisome | 28.14 | 29.75 |
| Bra014316.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 28.14 | 29.75 |
| AT1G52191.1 | Thale cress | cytosol, extracellular, golgi | 24.55 | 29.71 |
| Os04t0436100-01 | Rice | cytosol | 26.95 | 29.41 |
| KRH47262 | Soybean | cytosol | 18.56 | 25.41 |
| Os02t0521700-01 | Rice | cytosol | 23.35 | 21.43 |
| VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 35.33 | 19.6 |
Protein Annotations
| Gene3D:3.10.129.10 | MapMan:35.2 | EntrezGene:4325880 | EMBL:AK108111 | ProteinID:BAA94776.1 | ProteinID:BAF04401.1 |
| ProteinID:BAS71160.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf | EnsemblPlantsGene:Os01g0229500 | EnsemblPlants:Os01t0229500-01 |
| PFAM:PF03061 | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF16 | UniProt:Q9LWL3 | SUPFAM:SSF54637 | InterPro:Thioestr_dom |
| UniParc:UPI00000A268C | RefSeq:XP_015621717.1 | SEG:seg | : | : | : |
Description
Thioesterase superfamily domain containing protein. (Os01t0229500-01)
Coordinates
chr1:+:7173618..7175779
Molecular Weight (calculated)
17591.0 Da
IEP (calculated)
6.789
GRAVY (calculated)
-0.079
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSAAAAPP APAWMAAGAR RWLEEAGVAF DGSDRRAFNA LPLAGARVSL AEAGRAVCSL RVTAELTDAE GNWHPGAIAA AADDVCAAAI MSVEGIIKVS
101: VHYDISYFSP AKLHEEVELD GRVVEQKGKM TAVTVEIRKK DSGELVAIGR QWMSTTRPKK DQASSKL
101: VHYDISYFSP AKLHEEVELD GRVVEQKGKM TAVTVEIRKK DSGELVAIGR QWMSTTRPKK DQASSKL
001: MVDPTIHNTT TYLEEIAKGN GQTEFEILIL KGLELIHVGK GILRCKLLVT DHVVGEDGSW NAGVITAVMD SIGASAVYSS GGGLHISVDL NSSFYSTAKI
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
Arabidopsis Description
At3g16179/At3g16179 [Source:UniProtKB/TrEMBL;Acc:Q940V5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.