Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70889 | Canola | cytosol, peroxisome | 25.36 | 60.34 |
| CDX87876 | Canola | peroxisome | 65.94 | 57.59 |
| Bra014316.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 60.87 | 53.16 |
| AT3G16175.1 | Thale cress | cytosol | 54.35 | 47.77 |
| Zm00001d030077_P001 | Maize | peroxisome | 18.84 | 29.55 |
| KRH44334 | Soybean | peroxisome | 33.33 | 29.11 |
| Zm00001d006909_P001 | Maize | peroxisome | 29.71 | 25.31 |
| Zm00001d052281_P001 | Maize | peroxisome | 29.71 | 25.31 |
| TraesCS3D01G162100.1 | Wheat | peroxisome | 30.43 | 25.3 |
| TraesCS3B01G181000.1 | Wheat | peroxisome | 30.43 | 25.3 |
| Zm00001d008999_P001 | Maize | peroxisome, plastid | 28.99 | 24.69 |
| Zm00001d002652_P001 | Maize | peroxisome, plastid | 28.99 | 24.69 |
| Os01t0229500-01 | Rice | plastid | 29.71 | 24.55 |
| EES02196 | Sorghum | plastid | 28.99 | 24.54 |
| AT1G04290.1 | Thale cress | cytosol | 27.54 | 24.52 |
| TraesCS3A01G154700.1 | Wheat | peroxisome | 28.99 | 24.39 |
| AT2G29590.1 | Thale cress | cytosol | 26.09 | 22.78 |
| Zm00001d005676_P002 | Maize | peroxisome | 28.99 | 21.62 |
| Zm00001d039303_P001 | Maize | peroxisome | 25.36 | 21.47 |
| EES15320 | Sorghum | cytosol | 26.09 | 20.57 |
| KRH47262 | Soybean | cytosol | 18.12 | 20.49 |
| TraesCS3A01G154800.1 | Wheat | peroxisome | 25.36 | 20.0 |
| VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 42.75 | 19.6 |
| TraesCS3D01G162200.1 | Wheat | cytosol | 23.91 | 18.86 |
| KXG31495 | Sorghum | peroxisome | 26.09 | 17.65 |
| TraesCS3B01G181100.1 | Wheat | cytosol, mitochondrion, nucleus | 23.91 | 14.29 |
Protein Annotations
| Gene3D:3.10.129.10 | MapMan:35.2 | EntrezGene:6241250 | ProteinID:AEE32767.1 | ArrayExpress:AT1G52191 | EnsemblPlantsGene:AT1G52191 |
| RefSeq:AT1G52191 | TAIR:AT1G52191 | RefSeq:AT1G52191-TAIR-G | EnsemblPlants:AT1G52191.1 | TAIR:AT1G52191.1 | UniProt:B3H4T3 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf | RefSeq:NP_001117468.1 | PANTHER:PTHR21660 |
| PANTHER:PTHR21660:SF16 | SUPFAM:SSF54637 | UniParc:UPI0001739067 | SEG:seg | : | : |
Description
Thioesterase superfamily protein [Source:UniProtKB/TrEMBL;Acc:B3H4T3]
Coordinates
chr1:-:19439367..19441724
Molecular Weight (calculated)
15332.8 Da
IEP (calculated)
7.162
GRAVY (calculated)
0.149
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLFILEGLQ VIHVGRGIVR CKLTVTHHVL NEDGTLHTAA IGVLMELMGA IAIYSAGGSH TSVDLNYSLY STAKIQEEIK IEARVVGKRS ENLNSAIIEI
101: RREYEEELIA TGRLWMSLLK TPFSLNVKHN GVDQVSKL
101: RREYEEELIA TGRLWMSLLK TPFSLNVKHN GVDQVSKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.