Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31495 | Sorghum | peroxisome | 77.3 | 61.76 |
| TraesCS3A01G154800.1 | Wheat | peroxisome | 57.06 | 53.14 |
| TraesCS3D01G162200.1 | Wheat | cytosol | 56.44 | 52.57 |
| Zm00001d008999_P001 | Maize | peroxisome, plastid | 46.63 | 46.91 |
| Zm00001d030077_P001 | Maize | peroxisome | 24.54 | 45.45 |
| Zm00001d002652_P001 | Maize | peroxisome, plastid | 44.79 | 45.06 |
| Zm00001d052281_P001 | Maize | peroxisome | 42.33 | 42.59 |
| Zm00001d006909_P001 | Maize | peroxisome | 42.33 | 42.59 |
| TraesCS3B01G181100.1 | Wheat | cytosol, mitochondrion, nucleus | 59.51 | 41.99 |
| Zm00001d005676_P002 | Maize | peroxisome | 43.56 | 38.38 |
| CDY70889 | Canola | cytosol, peroxisome | 11.66 | 32.76 |
| CDY28372 | Canola | peroxisome | 29.45 | 30.38 |
| KRH44334 | Soybean | peroxisome | 28.83 | 29.75 |
| CDY20186 | Canola | cytosol | 28.83 | 29.75 |
| Bra021167.1-P | Field mustard | cytosol | 28.83 | 29.75 |
| AT3G16175.1 | Thale cress | cytosol | 26.38 | 27.39 |
| Zm00001d003630_P001 | Maize | extracellular | 25.15 | 26.62 |
| AT1G52191.1 | Thale cress | cytosol, extracellular, golgi | 21.47 | 25.36 |
| Zm00001d025445_P001 | Maize | extracellular | 23.93 | 25.32 |
| CDX87876 | Canola | peroxisome | 24.54 | 25.32 |
| KRH47262 | Soybean | cytosol | 18.4 | 24.59 |
| Bra014316.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 23.31 | 24.05 |
| Zm00001d026704_P001 | Maize | peroxisome | 23.31 | 21.84 |
| Zm00001d048584_P001 | Maize | cytosol | 19.63 | 18.93 |
| VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 32.52 | 17.61 |
Protein Annotations
| EnsemblPlants:Zm00001d039303_P001 | EnsemblPlants:Zm00001d039303_T001 | EnsemblPlantsGene:Zm00001d039303 | Gene3D:3.10.129.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf | InterPro:Thioestr_dom | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF16 |
| PFAM:PF03061 | ProteinID:ONM28248.1 | SEG:seg | SUPFAM:SSF54637 | UniParc:UPI0002212DB4 | UniProt:A0A1D6MF39 |
| MapMan:35.2 | : | : | : | : | : |
Description
Thioesterase superfamily protein
Coordinates
chr3:-:1394245..1395354
Molecular Weight (calculated)
17070.3 Da
IEP (calculated)
8.323
GRAVY (calculated)
0.061
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDGETRLVA AATARKWLED PRVGYDGGVG SQALSCVAIA GARVSVAERG RVVCSLRVRA PVADAEGRWH AGAIAAAVDC VCSAVAYTVE AAPTATVHYS
101: LSYFSPADRD TEVEVEGRVV GRMGKLTAAV VVVRDKESGE LVAVGRQWVT PAWPTKANKT SKL
101: LSYFSPADRD TEVEVEGRVV GRMGKLTAAV VVVRDKESGE LVAVGRQWVT PAWPTKANKT SKL
001: MVDPTIHNTT TYLEEIAKGN GQTEFEILIL KGLELIHVGK GILRCKLLVT DHVVGEDGSW NAGVITAVMD SIGASAVYSS GGGLHISVDL NSSFYSTAKI
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
Arabidopsis Description
At3g16179/At3g16179 [Source:UniProtKB/TrEMBL;Acc:Q940V5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.