CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
endoplasmic reticulum 1
plasma membrane 1
vacuole 1
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44334	Soybean	peroxisome	73.77	56.96
Bra014316.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	28.69	22.15
CDX87876	Canola	peroxisome	28.69	22.15
Zm00001d002652_P001	Maize	peroxisome, plastid	28.69	21.6
Bra021167.1-P	Field mustard	cytosol	27.87	21.52
CDY20186	Canola	cytosol	27.87	21.52
CDY28372	Canola	peroxisome	27.87	21.52
AT3G16175.1	Thale cress	cytosol	26.23	20.38
Zm00001d052281_P001	Maize	peroxisome	27.05	20.37
Zm00001d008999_P001	Maize	peroxisome, plastid	27.05	20.37
Zm00001d006909_P001	Maize	peroxisome	27.05	20.37
EES02196	Sorghum	plastid	25.41	19.02
TraesCS3A01G154700.1	Wheat	peroxisome	25.41	18.9
TraesCS3B01G181000.1	Wheat	peroxisome	25.41	18.67
Os01t0229500-01	Rice	plastid	25.41	18.56
Zm00001d039303_P001	Maize	peroxisome	24.59	18.4
AT1G52191.1	Thale cress	cytosol, extracellular, golgi	20.49	18.12
TraesCS3D01G162100.1	Wheat	peroxisome	24.59	18.07
Zm00001d005676_P002	Maize	peroxisome	27.05	17.84
KRH72635	Soybean	mitochondrion	20.49	15.72
EES15320	Sorghum	cytosol	22.13	15.43
Zm00001d030077_P001	Maize	peroxisome	10.66	14.77
KRH16998	Soybean	cytosol, nucleus, peroxisome	11.48	13.73
TraesCS3A01G154800.1	Wheat	peroxisome	19.67	13.71
TraesCS3D01G162200.1	Wheat	cytosol	19.67	13.71
KRH63917	Soybean	cytosol	18.03	13.66
KXG31495	Sorghum	peroxisome	22.13	13.24
KRH63916	Soybean	peroxisome	14.75	12.86
VIT_09s0002g04160.t01	Wine grape	cytoskeleton, cytosol, peroxisome	30.33	12.29
TraesCS3B01G181100.1	Wheat	cytosol, mitochondrion, nucleus	19.67	10.39
CDY70889	Canola	cytosol, peroxisome	3.28	6.9

Protein Annotations

EMBL:ACUP02004143	EnsemblPlants:KRH47262	EnsemblPlantsGene:GLYMA_07G018900	Gene3D:3.10.129.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0047617	InterPro:HotDog_dom_sf	PANTHER:PTHR21660	PANTHER:PTHR21660:SF16	ProteinID:KRH47262
ProteinID:KRH47262.1	SUPFAM:SSF54637	UniParc:UPI000295E5EF	UniProt:I1KGM5	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr7:-:1503327..1504982

Molecular Weight (calculated)

13503.3 Da

IEP (calculated)

6.500

GRAVY (calculated)

0.306

Length

122 amino acids

Sequence
(BLAST)

001: MVEKEMEDPS LEVIRKWIKG LSDGTYGQEF TSTTRVIRLV KAHKGFILCD LIIHSGLLDE NGNWHVSAIA TLVDIIASFT SYSVTSCLQV TLDLSISYYS
101: TAKLQAVFSS SCIIHFLTIG RG

Best Arabidopsis Sequence Match ( AT3G16175.1 )
(BLAST)

001: MVDPTIHNTT TYLEEIAKGN GQTEFEILIL KGLELIHVGK GILRCKLLVT DHVVGEDGSW NAGVITAVMD SIGASAVYSS GGGLHISVDL NSSFYSTAKI
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL

Arabidopsis Description

At3g16179/At3g16179 [Source:UniProtKB/TrEMBL;Acc:Q940V5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.