CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
peroxisome 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16998	Soybean	cytosol, nucleus, peroxisome	49.69	77.45
PGSC0003DMT400078213	Potato	cytosol, peroxisome, plastid	68.55	68.99
Solyc06g076690.2.1	Tomato	cytosol, peroxisome, plastid	66.04	66.46
Bra018375.1-P	Field mustard	peroxisome	61.01	61.01
CDY53360	Canola	peroxisome	59.12	59.12
Solyc06g076680.2.1	Tomato	cytosol, nucleus, peroxisome	57.86	58.23
CDY45458	Canola	peroxisome	57.86	57.86
VIT_06s0004g06050.t01	Wine grape	cytosol	55.97	56.33
AT2G29590.1	Thale cress	cytosol	55.97	56.33
PGSC0003DMT400078209	Potato	cytosol	57.86	54.12
GSMUA_Achr5P28830_001	Banana	cytosol	52.83	53.16
HORVU4Hr1G027140.2	Barley	cytosol	33.33	43.44
Os02t0521700-01	Rice	cytosol	48.43	42.31
TraesCS4A01G179200.1	Wheat	cytosol	45.91	39.25
HORVU4Hr1G027080.1	Barley	plastid	44.65	38.8
TraesCS4D01G134100.1	Wheat	cytosol	45.28	38.71
Zm00001d048584_P001	Maize	cytosol	40.88	38.46
EES10320	Sorghum	cytosol	42.14	37.64
TraesCS4D01G134200.1	Wheat	cytosol	42.77	36.56
TraesCS4A01G179300.1	Wheat	cytosol, mitochondrion, plastid	42.14	36.02
TraesCS4B01G139500.1	Wheat	plastid	42.14	36.02
TraesCS4B01G139400.1	Wheat	mitochondrion	47.17	32.47
KRH63917	Soybean	cytosol	30.82	30.43
KRH63916	Soybean	peroxisome	22.64	25.71
KRH44334	Soybean	peroxisome	22.64	22.78
KRH47262	Soybean	cytosol	15.72	20.49

Protein Annotations

EMBL:ACUP02001223	EnsemblPlants:KRH72635	EnsemblPlantsGene:GLYMA_02G224300	Gene3D:3.10.129.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0016787	GO:GO:0047617
InterPro:HotDog_dom_sf	InterPro:Thioestr_dom	PANTHER:PTHR21660	PANTHER:PTHR21660:SF8	PFAM:PF03061	ProteinID:KRH72635
ProteinID:KRH72635.1	SUPFAM:SSF54637	UniParc:UPI00023BD6F9	UniProt:I1JHA4	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr2:-:41180850..41186229

Molecular Weight (calculated)

17244.9 Da

IEP (calculated)

9.713

GRAVY (calculated)

-0.082

Length

159 amino acids

Sequence
(BLAST)

001: MEKVREMLRL TQQESVAMSR LNSVPSLRAG DNSSFYEHFI LSGIRVDRVQ PGLVSCTFKV PSRLADRSGK LASGAIANLV DEVGGAVIHE EGLPMNVSVD
101: MSISFLSSVR VGDELEITSR LLGRKGGYSG TIVLLKNKAT GELIAEGRHS LFGRHNSKM

Best Arabidopsis Sequence Match ( AT2G29590.1 )
(BLAST)

001: MMEKIMEYLQ LSDEVVDDGE APRVEEFLGE GKSFYENFSL RGIRVNRVEP GFISCSFKVP LRLTDRDKNL ANGAIANLVD EVGGALVHGE GLPMSVSVDM
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL

Arabidopsis Description

At2g29590 [Source:UniProtKB/TrEMBL;Acc:Q9ZW37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.