CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
nucleus 2
peroxisome 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0130g00140.t01	Wine grape	cytosol	57.14	51.95
AT1G04290.1	Thale cress	cytosol	53.57	48.39
VIT_07s0130g00150.t01	Wine grape	peroxisome	52.86	48.05
KRH63917	Soybean	cytosol	54.29	47.2
CDY18217	Canola	peroxisome	51.43	46.75
PGSC0003DMT400059405	Potato	cytosol	50.0	45.75
Bra015301.1-P	Field mustard	cytosol	50.0	45.45
Solyc09g005390.2.1	Tomato	cytosol	49.29	45.1
CDX89829	Canola	cytosol	48.57	44.16
CDY15497	Canola	cytosol	49.29	43.12
Bra030563.1-P	Field mustard	cytosol	49.29	43.12
CDX86643	Canola	cytosol	48.57	42.5
TraesCS1B01G365900.1	Wheat	peroxisome	42.14	36.88
EES19410	Sorghum	peroxisome	42.86	36.81
TraesCS5D01G037100.1	Wheat	peroxisome	42.14	36.65
TraesCS5B01G028000.1	Wheat	peroxisome	40.71	35.4
TraesCS5A01G029400.1	Wheat	peroxisome	40.0	34.78
Zm00001d026704_P001	Maize	peroxisome	42.86	34.48
GSMUA_Achr9P00370_001	Banana	mitochondrion	45.71	31.07
HORVU5Hr1G007830.6	Barley	extracellular, peroxisome	37.86	26.5
KRH16998	Soybean	cytosol, nucleus, peroxisome	19.29	26.47
KRH72635	Soybean	mitochondrion	25.71	22.64
KRH44334	Soybean	peroxisome	24.29	21.52
KRH47262	Soybean	cytosol	12.86	14.75

Protein Annotations

EntrezGene:100527761	Gene3D:3.10.129.10	MapMan:35.2	EMBL:ACUP02002728	EnsemblPlantsGene:GLYMA_04G204200	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0016787
GO:GO:0047617	InterPro:HotDog_dom_sf	UniProt:K7KLB0	EnsemblPlants:KRH63916	ProteinID:KRH63916	ProteinID:KRH63916.1
InterPro:PAAI_dom	PFAM:PF03061	PANTHER:PTHR21660	PANTHER:PTHR21660:SF15	SUPFAM:SSF54637	TIGRFAMs:TIGR00369
InterPro:Thioestr_dom	UniParc:UPI0002339D90	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:47661936..47664072

Molecular Weight (calculated)

15146.1 Da

IEP (calculated)

7.924

GRAVY (calculated)

0.149

Length

140 amino acids

Sequence
(BLAST)

001: MDLESINKLL EEGAQSESPS HSLSTFYYIF IFFLTHDLSI FPSKNGGNSL HGGATATLVA LVGAAAILSA GHSSDSGVSV EINVSYFGAV YAHEEIEIDA
101: RVLRVGKAVA VVSVEFRKKK TGKVFAQWRH TKYLPITSKI

Best Arabidopsis Sequence Match ( AT1G04290.1 )
(BLAST)

001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL

Arabidopsis Description

F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.