Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- peroxisome 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89829 | Canola | cytosol | 95.45 | 95.45 |
| AT1G04290.1 | Thale cress | cytosol | 77.92 | 77.42 |
| Bra030563.1-P | Field mustard | cytosol | 79.87 | 76.88 |
| PGSC0003DMT400059405 | Potato | cytosol | 66.23 | 66.67 |
| VIT_07s0130g00140.t01 | Wine grape | cytosol | 64.94 | 64.94 |
| Solyc09g005390.2.1 | Tomato | cytosol | 64.29 | 64.71 |
| KRH63917 | Soybean | cytosol | 64.94 | 62.11 |
| VIT_07s0130g00150.t01 | Wine grape | peroxisome | 58.44 | 58.44 |
| TraesCS5D01G037100.1 | Wheat | peroxisome | 53.25 | 50.93 |
| TraesCS1B01G365900.1 | Wheat | peroxisome | 52.6 | 50.62 |
| KRH63916 | Soybean | peroxisome | 45.45 | 50.0 |
| TraesCS5A01G029400.1 | Wheat | peroxisome | 51.95 | 49.69 |
| TraesCS5B01G028000.1 | Wheat | peroxisome | 51.3 | 49.07 |
| EES19410 | Sorghum | peroxisome | 51.3 | 48.47 |
| Zm00001d026704_P001 | Maize | peroxisome | 48.7 | 43.1 |
| GSMUA_Achr9P00370_001 | Banana | mitochondrion | 53.25 | 39.81 |
| Bra018375.1-P | Field mustard | peroxisome | 33.77 | 32.7 |
| HORVU5Hr1G007830.6 | Barley | extracellular, peroxisome | 41.56 | 32.0 |
| Bra021167.1-P | Field mustard | cytosol | 25.97 | 25.32 |
| Bra014316.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 24.68 | 24.05 |
Protein Annotations
| EnsemblPlants:Bra015301.1 | EnsemblPlants:Bra015301.1-P | EnsemblPlantsGene:Bra015301 | Gene3D:3.10.129.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf | InterPro:PAAI_dom | InterPro:Thioestr_dom | PANTHER:PTHR21660 |
| PANTHER:PTHR21660:SF15 | PFAM:PF03061 | SUPFAM:SSF54637 | TIGRFAMs:TIGR00369 | UniParc:UPI000254409B | UniProt:M4DFM8 |
| MapMan:35.2 | : | : | : | : | : |
Description
AT1G04290 (E=2e-064) | thioesterase family protein
Coordinates
chrA10:+:2585374..2586020
Molecular Weight (calculated)
16902.5 Da
IEP (calculated)
9.044
GRAVY (calculated)
-0.153
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLESVKQYL EGDKEKEKES EVANLPPRFI ERFVAKGIKV DFIEHGRIVC SMKVQPHLLN AGNFLHGGAT ATLVDLIGSA VIHTTGLPHT GVSVEINVSY
101: LDSAFLDEEI EIESKALRVG KAVAVASVEL RKKKDGKLIA QGRHTKYLAP RSKL
101: LDSAFLDEEI EIESKALRVG KAVAVASVEL RKKKDGKLIA QGRHTKYLAP RSKL
001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
Arabidopsis Description
F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.