Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
- peroxisome 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0130g00140.t01 | Wine grape | cytosol | 75.97 | 75.97 |
| PGSC0003DMT400059405 | Potato | cytosol | 62.34 | 62.75 |
| Solyc09g005390.2.1 | Tomato | cytosol | 61.04 | 61.44 |
| KRH63917 | Soybean | cytosol | 62.99 | 60.25 |
| AT1G04290.1 | Thale cress | cytosol | 59.09 | 58.71 |
| Bra015301.1-P | Field mustard | cytosol | 58.44 | 58.44 |
| CDY18217 | Canola | peroxisome | 57.79 | 57.79 |
| CDX89829 | Canola | cytosol | 55.84 | 55.84 |
| CDY15497 | Canola | cytosol | 57.79 | 55.62 |
| Bra030563.1-P | Field mustard | cytosol | 57.79 | 55.62 |
| CDX86643 | Canola | cytosol | 56.49 | 54.38 |
| KRH63916 | Soybean | peroxisome | 48.05 | 52.86 |
| EES19410 | Sorghum | peroxisome | 50.65 | 47.85 |
| TraesCS1B01G365900.1 | Wheat | peroxisome | 49.35 | 47.5 |
| TraesCS5D01G037100.1 | Wheat | peroxisome | 49.35 | 47.2 |
| TraesCS5A01G029400.1 | Wheat | peroxisome | 48.05 | 45.96 |
| TraesCS5B01G028000.1 | Wheat | peroxisome | 47.4 | 45.34 |
| GSMUA_Achr9P00370_001 | Banana | mitochondrion | 59.09 | 44.17 |
| Zm00001d026704_P001 | Maize | peroxisome | 49.35 | 43.68 |
| VIT_06s0004g06050.t01 | Wine grape | cytosol | 33.77 | 32.91 |
| HORVU5Hr1G007830.6 | Barley | extracellular, peroxisome | 40.91 | 31.5 |
| VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 31.17 | 15.95 |
Protein Annotations
| EntrezGene:100251023 | wikigene:100251023 | Gene3D:3.10.129.10 | MapMan:35.2 | EMBL:AM476355 | ProteinID:CAN70724 |
| ProteinID:CAN70724.1 | ProteinID:CBI27697 | ProteinID:CBI27697.3 | UniProt:D7TB24 | EMBL:FN595755 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0016787 |
| GO:GO:0047617 | InterPro:HotDog_dom_sf | EntrezGene:LOC100251023 | wikigene:LOC100251023 | InterPro:PAAI_dom | PFAM:PF03061 |
| PANTHER:PTHR21660 | PANTHER:PTHR21660:SF15 | SUPFAM:SSF54637 | TIGR:TC59751 | TIGRFAMs:TIGR00369 | InterPro:Thioestr_dom |
| UniParc:UPI00015CC57C | ArrayExpress:VIT_07s0130g00150 | EnsemblPlantsGene:VIT_07s0130g00150 | EnsemblPlants:VIT_07s0130g00150.t01 | unigene:Vvi.6205 | RefSeq:XP_002271369 |
| RefSeq:XP_002271369.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:-:20424215..20428027
Molecular Weight (calculated)
16373.2 Da
IEP (calculated)
10.068
GRAVY (calculated)
0.214
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLGSVKRNL EKKEGTESAS LINSMPSQVF DPFILHGLHI DLVERGRLIC SMKVPPRLLN TAKTLHGGAT ASLVDLVGAA AIATVGSPLT GVSVEISVSF
101: LDAAFVDEEI EIEAKVLRVG KSVGVVSVEI RKKKTGKIVA QGRHTKFLAV PSKM
101: LDAAFVDEEI EIEAKVLRVG KSVGVVSVEI RKKKTGKIVA QGRHTKFLAV PSKM
001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
Arabidopsis Description
F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.