Factsheet for GSMUA_Achr9P00370_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G037100.1	Wheat	peroxisome	51.94	66.46
TraesCS5B01G028000.1	Wheat	peroxisome	51.94	66.46
TraesCS5A01G029400.1	Wheat	peroxisome	51.94	66.46
TraesCS1B01G365900.1	Wheat	peroxisome	51.46	66.25
VIT_07s0130g00140.t01	Wine grape	cytosol	46.12	61.69
AT1G04290.1	Thale cress	cytosol	45.63	60.65
VIT_07s0130g00150.t01	Wine grape	peroxisome	44.17	59.09
EES19410	Sorghum	peroxisome	46.6	58.9
Zm00001d026704_P001	Maize	peroxisome	48.06	56.9
Solyc09g005390.2.1	Tomato	cytosol	42.23	56.86
PGSC0003DMT400059405	Potato	cytosol	41.26	55.56
CDY18217	Canola	peroxisome	40.29	53.9
Bra015301.1-P	Field mustard	cytosol	39.81	53.25
CDX89829	Canola	cytosol	39.81	53.25
CDX86643	Canola	cytosol	40.78	52.5
KRH63917	Soybean	cytosol	40.78	52.17
CDY15497	Canola	cytosol	39.32	50.62
Bra030563.1-P	Field mustard	cytosol	39.32	50.62
KRH63916	Soybean	peroxisome	31.07	45.71
HORVU5Hr1G007830.6	Barley	extracellular, peroxisome	41.26	42.5
GSMUA_Achr5P28830_001	Banana	cytosol	23.3	30.38
GSMUA_Achr10P...	Banana	peroxisome	38.35	17.67

Protein Annotations

EnsemblPlants:GSMUA_Achr9P00370_001	EnsemblPlants:GSMUA_Achr9T00370_001	EnsemblPlantsGene:GSMUA_Achr9G00370_001	Gene3D:3.10.129.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0047617	InterPro:HotDog_dom_sf	InterPro:PAAI_dom	InterPro:Thioestr_dom	PANTHER:PTHR21660
PANTHER:PTHR21660:SF15	PFAM:PF03061	SEG:seg	SUPFAM:SSF54637	TIGRFAMs:TIGR00369	UniParc:UPI00029676B9
UniProt:M0TW94	MapMan:35.2	:	:	:	:

Description

Putative Acyl-coenzyme A thioesterase 13 [Source:GMGC_GENE;Acc:GSMUA_Achr9G00370_001]

Coordinates

chr9:+:358667..365516

Molecular Weight (calculated)

22205.0 Da

IEP (calculated)

9.703

GRAVY (calculated)

0.040

Length

206 amino acids

Sequence
(BLAST)

001: MARTRPQWRK ALVIASTLET TSTWISRSPC LVRLGANTPV PSSPPPFVDE QMALDSAKRS LEAAAEEILP TPALDALPSK FYDAFILRGL RVDLVEPGHL
101: LCSMTVPPRL LNTGNFLHGG ATASLVDLVG SAAFYTAGAQ SRGVPMEIGI SYLDAAFANE EIEIEAKILR AGKAVGVVNV ELRKKKTRKI VANARYTKYL
201: APSSNL

Best Arabidopsis Sequence Match ( AT1G04290.1 )
(BLAST)

001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL

Arabidopsis Description

F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.