Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16998 | Soybean | cytosol, nucleus, peroxisome | 38.61 | 59.8 |
| VIT_06s0004g06050.t01 | Wine grape | cytosol | 57.59 | 57.59 |
| Solyc06g076690.2.1 | Tomato | cytosol, peroxisome, plastid | 53.8 | 53.8 |
| KRH72635 | Soybean | mitochondrion | 53.16 | 52.83 |
| PGSC0003DMT400078213 | Potato | cytosol, peroxisome, plastid | 52.53 | 52.53 |
| AT2G29590.1 | Thale cress | cytosol | 50.0 | 50.0 |
| CDY45458 | Canola | peroxisome | 48.73 | 48.43 |
| CDY53360 | Canola | peroxisome | 48.1 | 47.8 |
| Solyc06g076680.2.1 | Tomato | cytosol, nucleus, peroxisome | 47.47 | 47.47 |
| Bra018375.1-P | Field mustard | peroxisome | 47.47 | 47.17 |
| PGSC0003DMT400078209 | Potato | cytosol | 48.1 | 44.71 |
| HORVU4Hr1G027140.2 | Barley | cytosol | 33.54 | 43.44 |
| Zm00001d048584_P001 | Maize | cytosol | 46.2 | 43.2 |
| EES10320 | Sorghum | cytosol | 46.2 | 41.01 |
| HORVU4Hr1G027080.1 | Barley | plastid | 43.04 | 37.16 |
| Os02t0521700-01 | Rice | cytosol | 42.41 | 36.81 |
| TraesCS4D01G134100.1 | Wheat | cytosol | 43.04 | 36.56 |
| TraesCS4A01G179200.1 | Wheat | cytosol | 42.41 | 36.02 |
| TraesCS4D01G134200.1 | Wheat | cytosol | 42.41 | 36.02 |
| TraesCS4B01G139500.1 | Wheat | plastid | 39.87 | 33.87 |
| TraesCS4A01G179300.1 | Wheat | cytosol, mitochondrion, plastid | 38.61 | 32.8 |
| TraesCS4B01G139400.1 | Wheat | mitochondrion | 42.41 | 29.0 |
| GSMUA_Achr9P00370_001 | Banana | mitochondrion | 30.38 | 23.3 |
| GSMUA_Achr10P... | Banana | peroxisome | 28.48 | 10.07 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P28830_001 | EnsemblPlants:GSMUA_Achr5T28830_001 | EnsemblPlantsGene:GSMUA_Achr5G28830_001 | Gene3D:3.10.129.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0016787 |
| GO:GO:0047617 | InterPro:HotDog_dom_sf | InterPro:Thioestr_dom | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF8 | PFAM:PF03061 |
| SUPFAM:SSF54637 | UniParc:UPI0002961C19 | UniProt:M0T2K7 | MapMan:35.2 | : | : |
Description
thioesterase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G28830_001]
Coordinates
chr5:-:28833620..28835061
Molecular Weight (calculated)
16963.5 Da
IEP (calculated)
8.108
GRAVY (calculated)
-0.027
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKARAILSV GEEESERVAR LDVRPHRAGH AASFYEGFAT RGLRVDCIRP GFLSCTFKVP PRLTDAGGNL SPGAIANLVD EVAAAVIHSE GHHMKISVDM
101: SISYMCAAKV DDELEIISKV LGHKGGYSGT YVLLKNKATG EVVAEGRHSL FGKLVSKI
101: SISYMCAAKV DDELEIISKV LGHKGGYSGT YVLLKNKATG EVVAEGRHSL FGKLVSKI
001: MMEKIMEYLQ LSDEVVDDGE APRVEEFLGE GKSFYENFSL RGIRVNRVEP GFISCSFKVP LRLTDRDKNL ANGAIANLVD EVGGALVHGE GLPMSVSVDM
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL
Arabidopsis Description
At2g29590 [Source:UniProtKB/TrEMBL;Acc:Q9ZW37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.