Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048584_P001 | Maize | cytosol | 69.1 | 72.78 |
| HORVU4Hr1G027140.2 | Barley | cytosol | 38.76 | 56.56 |
| TraesCS4A01G179200.1 | Wheat | cytosol | 55.06 | 52.69 |
| HORVU4Hr1G027080.1 | Barley | plastid | 53.37 | 51.91 |
| TraesCS4D01G134100.1 | Wheat | cytosol | 53.37 | 51.08 |
| Os02t0521700-01 | Rice | cytosol | 50.56 | 49.45 |
| KRH16998 | Soybean | cytosol, nucleus, peroxisome | 26.97 | 47.06 |
| GSMUA_Achr5P28830_001 | Banana | cytosol | 41.01 | 46.2 |
| TraesCS4B01G139500.1 | Wheat | plastid | 47.75 | 45.7 |
| TraesCS4A01G179300.1 | Wheat | cytosol, mitochondrion, plastid | 47.19 | 45.16 |
| TraesCS4D01G134200.1 | Wheat | cytosol | 47.19 | 45.16 |
| AT2G29590.1 | Thale cress | cytosol | 38.76 | 43.67 |
| PGSC0003DMT400078213 | Potato | cytosol, peroxisome, plastid | 37.64 | 42.41 |
| Solyc06g076690.2.1 | Tomato | cytosol, peroxisome, plastid | 37.64 | 42.41 |
| KRH72635 | Soybean | mitochondrion | 37.64 | 42.14 |
| CDY45458 | Canola | peroxisome | 37.64 | 42.14 |
| TraesCS4B01G139400.1 | Wheat | mitochondrion | 54.49 | 41.99 |
| VIT_06s0004g06050.t01 | Wine grape | cytosol | 37.08 | 41.77 |
| CDY53360 | Canola | peroxisome | 35.96 | 40.25 |
| Bra018375.1-P | Field mustard | peroxisome | 35.39 | 39.62 |
| Solyc06g076680.2.1 | Tomato | cytosol, nucleus, peroxisome | 32.58 | 36.71 |
| PGSC0003DMT400078209 | Potato | cytosol | 32.02 | 33.53 |
| OQU87989 | Sorghum | peroxisome | 26.97 | 30.19 |
| EES19410 | Sorghum | peroxisome | 23.03 | 25.15 |
| EES02196 | Sorghum | plastid | 23.03 | 25.15 |
| OQU81612 | Sorghum | cytosol, nucleus, peroxisome | 21.35 | 24.68 |
| EES15320 | Sorghum | cytosol | 19.66 | 20.0 |
| KXG31495 | Sorghum | peroxisome | 20.22 | 17.65 |
Protein Annotations
| Gene3D:3.10.129.10 | MapMan:35.2 | EntrezGene:8079947 | UniProt:C5Y1U1 | EnsemblPlants:EES10320 | ProteinID:EES10320 |
| ProteinID:EES10320.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf | PANTHER:PTHR21660 |
| PANTHER:PTHR21660:SF8 | EnsemblPlantsGene:SORBI_3005G232000 | SUPFAM:SSF54637 | UniParc:UPI0001A86ACE | RefSeq:XP_002451332.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr5:-:71825344..71825880
Molecular Weight (calculated)
18342.9 Da
IEP (calculated)
6.891
GRAVY (calculated)
0.183
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASDSDDLI KEALLQVRVR DEDGALVDAL NRRAAAATAA RGEPSPSPSF FEGFALQGIR VESILPGHIL CSFTVPARLT AGDNHIAPGA VVALVDEIGS
101: AASVSDGHHL KVSVDMSVNF VNLAAAAPGD ALRITARALG HKGAYSGTHV LVANAATGQV VAEGRHSLFG KMKIRSNI
101: AASVSDGHHL KVSVDMSVNF VNLAAAAPGD ALRITARALG HKGAYSGTHV LVANAATGQV VAEGRHSLFG KMKIRSNI
001: MMEKIMEYLQ LSDEVVDDGE APRVEEFLGE GKSFYENFSL RGIRVNRVEP GFISCSFKVP LRLTDRDKNL ANGAIANLVD EVGGALVHGE GLPMSVSVDM
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL
Arabidopsis Description
At2g29590 [Source:UniProtKB/TrEMBL;Acc:Q9ZW37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.