CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008999_P001	Maize	peroxisome, plastid	81.6	82.1
Zm00001d030077_P001	Maize	peroxisome	43.56	80.68
Zm00001d052281_P001	Maize	peroxisome	78.53	79.01
Zm00001d006909_P001	Maize	peroxisome	78.53	79.01
Zm00001d002652_P001	Maize	peroxisome, plastid	77.91	78.4
Os01t0229500-01	Rice	plastid	76.69	74.85
Zm00001d005676_P002	Maize	peroxisome	84.66	74.59
TraesCS3B01G181000.1	Wheat	peroxisome	75.46	74.1
TraesCS3A01G154700.1	Wheat	peroxisome	74.23	73.78
TraesCS3D01G162100.1	Wheat	peroxisome	74.23	72.89
EES15320	Sorghum	cytosol	54.6	50.86
KXG31495	Sorghum	peroxisome	48.47	38.73
CDY70889	Canola	cytosol, peroxisome	11.66	32.76
OQU87989	Sorghum	peroxisome	30.67	31.45
KRH44334	Soybean	peroxisome	29.45	30.38
OQU81612	Sorghum	cytosol, nucleus, peroxisome	28.22	29.87
CDY28372	Canola	peroxisome	28.22	29.11
CDY20186	Canola	cytosol	28.22	29.11
Bra021167.1-P	Field mustard	cytosol	28.22	29.11
AT1G52191.1	Thale cress	cytosol, extracellular, golgi	24.54	28.99
AT3G16175.1	Thale cress	cytosol	27.61	28.66
CDX87876	Canola	peroxisome	26.99	27.85
Bra014316.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	26.38	27.22
EES19410	Sorghum	peroxisome	26.99	26.99
KRH47262	Soybean	cytosol	19.02	25.41
EES10320	Sorghum	cytosol	25.15	23.03
VIT_09s0002g04160.t01	Wine grape	cytoskeleton, cytosol, peroxisome	36.2	19.6

Protein Annotations

Gene3D:3.10.129.10	MapMan:35.2	EntrezGene:8078107	UniProt:C5XJP0	EnsemblPlants:EES02196	ProteinID:EES02196
ProteinID:EES02196.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0016787	GO:GO:0047617	InterPro:HotDog_dom_sf	PFAM:PF03061	PANTHER:PTHR21660
PANTHER:PTHR21660:SF16	EnsemblPlantsGene:SORBI_3003G008300	SUPFAM:SSF54637	InterPro:Thioestr_dom	UniParc:UPI0001A84D98	RefSeq:XP_002457076.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:721161..723452

Molecular Weight (calculated)

17327.8 Da

IEP (calculated)

7.514

GRAVY (calculated)

-0.128

Length

163 amino acids

Sequence
(BLAST)

001: MGGGTAAEPP AWMAAAARRW LENAGATVED APGRAFNALP LSGVRVSLAE RGRALCSLRV PPQLTDAEGN WHTGAIAAAA DDVCAAAIMS VEGIIKVSVH
101: YDISYFTPAK LHEEVEMDGR VVEQKGRMTA VTVEIRKKES GELVAIGRQW MTASRPKGSQ SKI

Best Arabidopsis Sequence Match ( AT3G16175.1 )
(BLAST)

001: MVDPTIHNTT TYLEEIAKGN GQTEFEILIL KGLELIHVGK GILRCKLLVT DHVVGEDGSW NAGVITAVMD SIGASAVYSS GGGLHISVDL NSSFYSTAKI
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL

Arabidopsis Description

At3g16179/At3g16179 [Source:UniProtKB/TrEMBL;Acc:Q940V5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.