CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021167.1-P	Field mustard	cytosol	99.37	99.37
CDY20186	Canola	cytosol	98.73	98.73
AT3G16175.1	Thale cress	cytosol	72.15	72.61
CDX87876	Canola	peroxisome	55.7	55.7
CDY70889	Canola	cytosol, peroxisome	19.62	53.45
KRH44334	Soybean	peroxisome	34.18	34.18
Zm00001d030077_P001	Maize	peroxisome	18.35	32.95
TraesCS3A01G154700.1	Wheat	peroxisome	31.65	30.49
TraesCS3D01G162100.1	Wheat	peroxisome	31.65	30.12
TraesCS3B01G181000.1	Wheat	peroxisome	31.65	30.12
Zm00001d008999_P001	Maize	peroxisome, plastid	30.38	29.63
Zm00001d039303_P001	Maize	peroxisome	30.38	29.45
Os01t0229500-01	Rice	plastid	31.01	29.34
EES02196	Sorghum	plastid	29.11	28.22
EES15320	Sorghum	cytosol	31.01	28.0
KRH47262	Soybean	cytosol	21.52	27.87
Zm00001d006909_P001	Maize	peroxisome	28.48	27.78
Zm00001d052281_P001	Maize	peroxisome	28.48	27.78
CDY45458	Canola	peroxisome	27.85	27.67
CDY15497	Canola	cytosol	27.85	27.5
CDX86643	Canola	cytosol	27.85	27.5
Zm00001d002652_P001	Maize	peroxisome, plastid	27.85	27.16
CDY53360	Canola	peroxisome	27.22	27.04
TraesCS3A01G154800.1	Wheat	peroxisome	29.11	26.29
CDY18217	Canola	peroxisome	25.32	25.97
TraesCS3D01G162200.1	Wheat	cytosol	27.85	25.14
CDX89829	Canola	cytosol	24.05	24.68
Zm00001d005676_P002	Maize	peroxisome	28.48	24.32
KXG31495	Sorghum	peroxisome	30.38	23.53
VIT_09s0002g04160.t01	Wine grape	cytoskeleton, cytosol, peroxisome	43.67	22.92
TraesCS3B01G181100.1	Wheat	cytosol, mitochondrion, nucleus	27.85	19.05

Protein Annotations

EnsemblPlants:CDY28372	EnsemblPlantsGene:GSBRNA2T00040183001	Gene3D:3.10.129.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0047617	InterPro:HotDog_dom_sf	InterPro:Thioestr_dom	PANTHER:PTHR21660	PANTHER:PTHR21660:SF16	PFAM:PF03061
ProteinID:CDY28372	ProteinID:CDY28372.1	SUPFAM:SSF54637	UniParc:UPI0004EE0519	UniProt:A0A078GTB4	MapMan:35.2

Description

BnaC01g35420DBnaC01g35420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTB4]

Coordinates

chrLK032218:-:453861..454785

Molecular Weight (calculated)

16870.3 Da

IEP (calculated)

6.681

GRAVY (calculated)

0.041

Length

158 amino acids

Sequence
(BLAST)

001: MEDSTILNTT TYLEALAQGN GLSEIEVLIL QGLELIHVGK GIIRCKLLVT DRVAGDDGTW HAGAITAVMD AIGAASVYST GDGLHSSVDL NASFYSAAKI
101: HEKVEVEARV KGTNGRLKSS VIEIRRERDG ELIATGRLWM APLVLKAKHT GSSNLSKL

Best Arabidopsis Sequence Match ( AT3G16175.1 )
(BLAST)

001: MVDPTIHNTT TYLEEIAKGN GQTEFEILIL KGLELIHVGK GILRCKLLVT DHVVGEDGSW NAGVITAVMD SIGASAVYSS GGGLHISVDL NSSFYSTAKI
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL

Arabidopsis Description

At3g16179/At3g16179 [Source:UniProtKB/TrEMBL;Acc:Q940V5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.