Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28372 | Canola | peroxisome | 72.61 | 72.15 |
| Bra021167.1-P | Field mustard | cytosol | 71.97 | 71.52 |
| CDY20186 | Canola | cytosol | 71.97 | 71.52 |
| AT1G52191.1 | Thale cress | cytosol, extracellular, golgi | 47.77 | 54.35 |
| Zm00001d030077_P001 | Maize | peroxisome | 18.47 | 32.95 |
| KRH44334 | Soybean | peroxisome | 33.12 | 32.91 |
| TraesCS3D01G162100.1 | Wheat | peroxisome | 32.48 | 30.72 |
| Os01t0229500-01 | Rice | plastid | 32.48 | 30.54 |
| TraesCS3B01G181000.1 | Wheat | peroxisome | 31.21 | 29.52 |
| TraesCS3A01G154700.1 | Wheat | peroxisome | 30.57 | 29.27 |
| Zm00001d052281_P001 | Maize | peroxisome | 29.94 | 29.01 |
| Zm00001d008999_P001 | Maize | peroxisome, plastid | 29.94 | 29.01 |
| Zm00001d006909_P001 | Maize | peroxisome | 29.94 | 29.01 |
| Zm00001d002652_P001 | Maize | peroxisome, plastid | 29.3 | 28.4 |
| EES02196 | Sorghum | plastid | 28.66 | 27.61 |
| Zm00001d039303_P001 | Maize | peroxisome | 27.39 | 26.38 |
| KRH47262 | Soybean | cytosol | 20.38 | 26.23 |
| AT2G29590.1 | Thale cress | cytosol | 26.11 | 25.95 |
| EES15320 | Sorghum | cytosol | 28.66 | 25.71 |
| Zm00001d005676_P002 | Maize | peroxisome | 29.3 | 24.86 |
| TraesCS3A01G154800.1 | Wheat | peroxisome | 26.75 | 24.0 |
| AT1G04290.1 | Thale cress | cytosol | 22.93 | 23.23 |
| TraesCS3D01G162200.1 | Wheat | cytosol | 25.48 | 22.86 |
| VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 43.31 | 22.59 |
| KXG31495 | Sorghum | peroxisome | 27.39 | 21.08 |
| TraesCS3B01G181100.1 | Wheat | cytosol, mitochondrion, nucleus | 25.48 | 17.32 |
Protein Annotations
| Gene3D:3.10.129.10 | MapMan:35.2 | EntrezGene:820863 | ProteinID:AEE75780.1 | ArrayExpress:AT3G16175 | EnsemblPlantsGene:AT3G16175 |
| RefSeq:AT3G16175 | TAIR:AT3G16175 | RefSeq:AT3G16175-TAIR-G | EnsemblPlants:AT3G16175.1 | TAIR:AT3G16175.1 | EMBL:AY052654 |
| EMBL:AY098959 | Unigene:At.71147 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf |
| RefSeq:NP_566538.1 | PFAM:PF03061 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0004507 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF16 | UniProt:Q940V5 | SUPFAM:SSF54637 | InterPro:Thioestr_dom |
| UniParc:UPI00000A31FC | : | : | : | : | : |
Description
At3g16179/At3g16179 [Source:UniProtKB/TrEMBL;Acc:Q940V5]
Coordinates
chr3:+:5480416..5481379
Molecular Weight (calculated)
16705.1 Da
IEP (calculated)
5.994
GRAVY (calculated)
0.157
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDPTIHNTT TYLEEIAKGN GQTEFEILIL KGLELIHVGK GILRCKLLVT DHVVGEDGSW NAGVITAVMD SIGASAVYSS GGGLHISVDL NSSFYSTAKI
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.