Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G162100.1 | Wheat | peroxisome | 96.95 | 95.78 |
TraesCS3B01G181000.1 | Wheat | peroxisome | 96.34 | 95.18 |
Zm00001d008999_P001 | Maize | peroxisome, plastid | 75.61 | 76.54 |
Zm00001d030077_P001 | Maize | peroxisome | 40.85 | 76.14 |
Zm00001d002652_P001 | Maize | peroxisome, plastid | 75.0 | 75.93 |
EES02196 | Sorghum | plastid | 73.78 | 74.23 |
Zm00001d052281_P001 | Maize | peroxisome | 72.56 | 73.46 |
Zm00001d006909_P001 | Maize | peroxisome | 72.56 | 73.46 |
Os01t0229500-01 | Rice | plastid | 70.12 | 68.86 |
Zm00001d005676_P002 | Maize | peroxisome | 74.39 | 65.95 |
TraesCS3A01G154800.1 | Wheat | peroxisome | 49.39 | 46.29 |
CDY70889 | Canola | cytosol, peroxisome | 12.2 | 34.48 |
TraesCS5A01G368100.1 | Wheat | extracellular | 18.9 | 34.07 |
Bra021167.1-P | Field mustard | cytosol | 30.49 | 31.65 |
CDY28372 | Canola | peroxisome | 30.49 | 31.65 |
TraesCS5A01G368200.1 | Wheat | peroxisome | 29.27 | 31.17 |
CDY20186 | Canola | cytosol | 29.88 | 31.01 |
AT3G16175.1 | Thale cress | cytosol | 29.27 | 30.57 |
KRH44334 | Soybean | peroxisome | 29.27 | 30.38 |
TraesCS5A01G029400.1 | Wheat | peroxisome | 29.27 | 29.81 |
AT1G52191.1 | Thale cress | cytosol, extracellular, golgi | 24.39 | 28.99 |
CDX87876 | Canola | peroxisome | 27.44 | 28.48 |
Bra014316.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 27.44 | 28.48 |
TraesCS2A01G306200.1 | Wheat | peroxisome | 24.39 | 26.85 |
KRH47262 | Soybean | cytosol | 18.9 | 25.41 |
TraesCS4A01G179200.1 | Wheat | cytosol | 24.39 | 21.51 |
TraesCS4A01G179300.1 | Wheat | cytosol, mitochondrion, plastid | 22.56 | 19.89 |
VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 35.98 | 19.6 |
Protein Annotations
EnsemblPlants:TraesCS3A01G154700.1 | EnsemblPlantsGene:TraesCS3A01G154700 | Gene3D:3.10.129.10 | InterPro:HotDog_dom_sf | InterPro:Thioestr_dom | PANTHER:PTHR21660 |
PANTHER:PTHR21660:SF16 | PFAM:PF03061 | SEG:seg | SUPFAM:SSF54637 | TIGR:cd03443 | MapMan:35.2 |
Description
No Description!
Coordinates
chr3A:+:146559171..146560960
Molecular Weight (calculated)
17503.0 Da
IEP (calculated)
8.729
GRAVY (calculated)
-0.151
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDPAPPAWM AAAARKWLED AGAIAEDGAG DGRRAFNALP LFGVRVSLAE RGRAVCSLRV PARLTDADGN WHAGAIAAAV DDVCAAAIMS VEGIIKVSVH
101: YDISYFAPAK HHEEVEMDGR VVDRKGRMTA VTTEVRKKES GALVAIGRQW MTTSRPKGYQ GSKL
101: YDISYFAPAK HHEEVEMDGR VVDRKGRMTA VTTEVRKKES GALVAIGRQW MTTSRPKGYQ GSKL
001: MVDPTIHNTT TYLEEIAKGN GQTEFEILIL KGLELIHVGK GILRCKLLVT DHVVGEDGSW NAGVITAVMD SIGASAVYSS GGGLHISVDL NSSFYSTAKI
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
Arabidopsis Description
At3g16179/At3g16179 [Source:UniProtKB/TrEMBL;Acc:Q940V5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.