Factsheet for Bra014316.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

plastid 2
peroxisome 3
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70889	Canola	cytosol, peroxisome	36.08	98.28
AT1G52191.1	Thale cress	cytosol, extracellular, golgi	53.16	60.87
Bra021167.1-P	Field mustard	cytosol	50.0	50.0
KRH44334	Soybean	peroxisome	34.81	34.81
Zm00001d030077_P001	Maize	peroxisome	18.35	32.95
KRH47262	Soybean	cytosol	22.15	28.69
Os01t0229500-01	Rice	plastid	29.75	28.14
Zm00001d008999_P001	Maize	peroxisome, plastid	28.48	27.78
Zm00001d002652_P001	Maize	peroxisome, plastid	28.48	27.78
TraesCS3A01G154700.1	Wheat	peroxisome	28.48	27.44
Zm00001d052281_P001	Maize	peroxisome	27.85	27.16
Zm00001d006909_P001	Maize	peroxisome	27.85	27.16
TraesCS3D01G162100.1	Wheat	peroxisome	28.48	27.11
TraesCS3B01G181000.1	Wheat	peroxisome	27.85	26.51
EES02196	Sorghum	plastid	27.22	26.38
Bra030563.1-P	Field mustard	cytosol	25.32	25.0
Bra015301.1-P	Field mustard	cytosol	24.05	24.68
TraesCS3D01G162200.1	Wheat	cytosol	26.58	24.0
EES15320	Sorghum	cytosol	26.58	24.0
Zm00001d005676_P002	Maize	peroxisome	27.85	23.78
TraesCS3A01G154800.1	Wheat	peroxisome	25.95	23.43
Zm00001d039303_P001	Maize	peroxisome	24.05	23.31
Bra018375.1-P	Field mustard	peroxisome	22.78	22.64
VIT_09s0002g04160.t01	Wine grape	cytoskeleton, cytosol, peroxisome	41.14	21.59
KXG31495	Sorghum	peroxisome	25.95	20.1
TraesCS3B01G181100.1	Wheat	cytosol, mitochondrion, nucleus	25.32	17.32

Protein Annotations

EnsemblPlants:Bra014316.1	EnsemblPlants:Bra014316.1-P	EnsemblPlantsGene:Bra014316	Gene3D:3.10.129.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0047617	InterPro:HotDog_dom_sf	InterPro:Thioestr_dom	PANTHER:PTHR21660	PANTHER:PTHR21660:SF16
PFAM:PF03061	SUPFAM:SSF54637	UniParc:UPI0002545BE6	UniProt:M4DCU9	MapMan:35.2	:

Description

AT1G52191 (E=4e-043) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: thioesterase family protein (TAIR:AT3G16175.1); Has 195 Blast hits to 195 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 28; Plants - 97; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

Coordinates

chrA08:+:1679879..1681079

Molecular Weight (calculated)

17159.7 Da

IEP (calculated)

6.003

GRAVY (calculated)

-0.012

Length

158 amino acids

Sequence
(BLAST)

001: MVHPALPKVT AYLGELSNAS LDYFPGSILQ GIQAIHVGKG IIECKLIIED RVLGEDGTIH TGAIAAIMEN IGATAIFSAG GSDHASVDFN YSLYSTAKKQ
101: DEVKIEARVI GRKDDLTSAV IEIRRECDEE LIATGRLWMV QRRSLNVKHN GVDLPSKL

Best Arabidopsis Sequence Match ( AT1G52191.1 )
(BLAST)

001: MFLFILEGLQ VIHVGRGIVR CKLTVTHHVL NEDGTLHTAA IGVLMELMGA IAIYSAGGSH TSVDLNYSLY STAKIQEEIK IEARVVGKRS ENLNSAIIEI
101: RREYEEELIA TGRLWMSLLK TPFSLNVKHN GVDQVSKL

Arabidopsis Description

Thioesterase superfamily protein [Source:UniProtKB/TrEMBL;Acc:B3H4T3]
SUBAcon: [golgi,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.