Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052281_P001 | Maize | peroxisome | 89.77 | 48.77 |
| Zm00001d006909_P001 | Maize | peroxisome | 89.77 | 48.77 |
| Zm00001d002652_P001 | Maize | peroxisome, plastid | 87.5 | 47.53 |
| Zm00001d008999_P001 | Maize | peroxisome, plastid | 85.23 | 46.3 |
| EES02196 | Sorghum | plastid | 80.68 | 43.56 |
| TraesCS3B01G181000.1 | Wheat | peroxisome | 78.41 | 41.57 |
| Zm00001d005676_P002 | Maize | peroxisome | 86.36 | 41.08 |
| TraesCS3D01G162100.1 | Wheat | peroxisome | 77.27 | 40.96 |
| TraesCS3A01G154700.1 | Wheat | peroxisome | 76.14 | 40.85 |
| Os01t0229500-01 | Rice | plastid | 76.14 | 40.12 |
| CDY70889 | Canola | cytosol, peroxisome | 23.86 | 36.21 |
| Zm00001d039303_P001 | Maize | peroxisome | 45.45 | 24.54 |
| AT1G52191.1 | Thale cress | cytosol, extracellular, golgi | 29.55 | 18.84 |
| AT3G16175.1 | Thale cress | cytosol | 32.95 | 18.47 |
| KRH44334 | Soybean | peroxisome | 32.95 | 18.35 |
| Bra021167.1-P | Field mustard | cytosol | 32.95 | 18.35 |
| Bra014316.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 32.95 | 18.35 |
| CDY20186 | Canola | cytosol | 32.95 | 18.35 |
| CDY28372 | Canola | peroxisome | 32.95 | 18.35 |
| CDX87876 | Canola | peroxisome | 28.41 | 15.82 |
| Zm00001d003630_P001 | Maize | extracellular | 26.14 | 14.94 |
| Zm00001d025445_P001 | Maize | extracellular | 25.0 | 14.29 |
| VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 43.18 | 12.62 |
| KRH47262 | Soybean | cytosol | 14.77 | 10.66 |
| Zm00001d048584_P001 | Maize | cytosol | 20.45 | 10.65 |
| Zm00001d026704_P001 | Maize | peroxisome | 20.45 | 10.34 |
Protein Annotations
| EnsemblPlants:Zm00001d030077_P001 | EnsemblPlants:Zm00001d030077_T001 | EnsemblPlantsGene:Zm00001d030077 | Gene3D:3.10.129.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf | InterPro:Thioestr_dom | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF16 |
| PFAM:PF03061 | ProteinID:ONM00137.1 | SUPFAM:SSF54637 | UniParc:UPI0002216ED2 | UniProt:A0A1D6K9H0 | MapMan:35.2 |
Description
Thioesterase superfamily protein
Coordinates
chr1:-:104096505..104097569
Molecular Weight (calculated)
9747.9 Da
IEP (calculated)
8.237
GRAVY (calculated)
-0.076
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MAADDVCAAT IMSVEGIVKV SVHYDISYFT PAKLHDEVEM DGRVVEQKGR MTAVAVEIRK KESGELVAIR RQWMTASRPK CVAAHSKI
001: MVDPTIHNTT TYLEEIAKGN GQTEFEILIL KGLELIHVGK GILRCKLLVT DHVVGEDGSW NAGVITAVMD SIGASAVYSS GGGLHISVDL NSSFYSTAKI
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
Arabidopsis Description
At3g16179/At3g16179 [Source:UniProtKB/TrEMBL;Acc:Q940V5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.