Factsheet for Zm00001d003630_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU81612	Sorghum	cytosol, nucleus, peroxisome	96.75	96.75
Zm00001d025445_P001	Maize	extracellular	94.16	94.16
Os04t0436100-01	Rice	cytosol	75.97	76.47
TraesCS2A01G306200.1	Wheat	peroxisome	73.38	75.84
TraesCS2D01G304600.1	Wheat	peroxisome	73.38	75.84
TraesCS2B01G322900.1	Wheat	peroxisome	72.08	74.5
HORVU2Hr1G076160.3	Barley	cytosol	48.7	60.0
Zm00001d026704_P001	Maize	peroxisome	43.51	38.51
Zm00001d002652_P001	Maize	peroxisome, plastid	29.22	27.78
Zm00001d008999_P001	Maize	peroxisome, plastid	29.22	27.78
Zm00001d052281_P001	Maize	peroxisome	28.57	27.16
Zm00001d006909_P001	Maize	peroxisome	28.57	27.16
Zm00001d030077_P001	Maize	peroxisome	14.94	26.14
Zm00001d005676_P002	Maize	peroxisome	30.52	25.41
Zm00001d039303_P001	Maize	peroxisome	26.62	25.15
Zm00001d048584_P001	Maize	cytosol	25.32	23.08
GSMUA_Achr10P...	Banana	peroxisome	48.7	16.78

Protein Annotations

EMBL:EU954404	EnsemblPlants:Zm00001d003630_P001	EnsemblPlants:Zm00001d003630_T001	EnsemblPlantsGene:Zm00001d003630	EntrezGene:100278796	Gene3D:3.10.129.10
GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	GO:GO:0047617	InterPro:HotDog_dom_sf	InterPro:PAAI_dom
InterPro:Thioestr_dom	PANTHER:PTHR21660	PANTHER:PTHR21660:SF15	PFAM:PF03061	ProteinID:ONM17308.1	SUPFAM:SSF54637
TIGRFAMs:TIGR00369	UniParc:UPI000182B86E	UniProt:B6SNT9	MapMan:35.2	:	:

Description

Thioesterase superfamily protein

Coordinates

chr2:+:51047805..51050712

Molecular Weight (calculated)

16255.7 Da

IEP (calculated)

9.191

GRAVY (calculated)

0.175

Length

154 amino acids

Sequence
(BLAST)

001: MGPEAVRKSL EPTATAEEIT GSTPARLHFY DPFVLSGVRI EAAEHGRLLC SFVVTPRLAS PVGYLRSGVT ATLADQLGSA VFFCSGIPSS GVSIEISVSF
101: VDSAAVGEEI EVEGKLLRAG KSVGVVSVDF RKKKTGKLMA QARHTKYLVA SSKL

Best Arabidopsis Sequence Match ( AT1G04290.1 )
(BLAST)

001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL

Arabidopsis Description

F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.