Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G304600.1 | Wheat | peroxisome | 100.0 | 100.0 |
| TraesCS2B01G322900.1 | Wheat | peroxisome | 94.63 | 94.63 |
| HORVU2Hr1G076160.3 | Barley | cytosol | 67.79 | 80.8 |
| Zm00001d025445_P001 | Maize | extracellular | 76.51 | 74.03 |
| OQU81612 | Sorghum | cytosol, nucleus, peroxisome | 75.84 | 73.38 |
| Zm00001d003630_P001 | Maize | extracellular | 75.84 | 73.38 |
| Os04t0436100-01 | Rice | cytosol | 73.83 | 71.9 |
| TraesCS5A01G029400.1 | Wheat | peroxisome | 43.62 | 40.37 |
| TraesCS5A01G368200.1 | Wheat | peroxisome | 40.27 | 38.96 |
| TraesCS5A01G368100.1 | Wheat | extracellular | 23.49 | 38.46 |
| TraesCS3A01G154800.1 | Wheat | peroxisome | 30.2 | 25.71 |
| TraesCS3A01G154700.1 | Wheat | peroxisome | 26.85 | 24.39 |
| TraesCS4A01G179200.1 | Wheat | cytosol | 26.17 | 20.97 |
| TraesCS4A01G179300.1 | Wheat | cytosol, mitochondrion, plastid | 22.15 | 17.74 |
| GSMUA_Achr10P... | Banana | peroxisome | 53.02 | 17.67 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G306200.1 | EnsemblPlantsGene:TraesCS2A01G306200 | Gene3D:3.10.129.10 | InterPro:HotDog_dom_sf | InterPro:PAAI_dom | InterPro:Thioestr_dom |
| PANTHER:PTHR21660 | PANTHER:PTHR21660:SF15 | PFAM:PF03061 | SEG:seg | SUPFAM:SSF54637 | TIGR:cd03443 |
| TIGRFAMs:TIGR00369 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:526730953..526739518
Molecular Weight (calculated)
15622.7 Da
IEP (calculated)
8.465
GRAVY (calculated)
0.162
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPEAVRRTL EPTASAADIS GSTPYDSFVI SGVRLEAAEH GRVLCSFVVT PRIASPQGYL LSGVTATLAD QLGSAVFFSS GVGTSGVSLE ISVSYVDTAA
101: VGEEIEVEAK LLRAGKSVGV VSVDFRKKRS GKLMAQARHT KYLAVSSRL
101: VGEEIEVEAK LLRAGKSVGV VSVDFRKKRS GKLMAQARHT KYLAVSSRL
001: MNWAKFRETG SPEDTDMSST PISSDTTAVS KVIDPNYVLM VADFFKAISP DESCNDFTSF DSFSVLFQNN TRALSIARGR VSCSVTVTPG ISNFFKGLHG
101: GAVASIAERV AMACVKTVVS EDKHLFIGEL SMSYLSSAPI SSELLVEGTV VRTGRNLSVV TVEFKIKETM KVTYLSRATF YHSPISKL
101: GAVASIAERV AMACVKTVVS EDKHLFIGEL SMSYLSSAPI SSELLVEGTV VRTGRNLSVV TVEFKIKETM KVTYLSRATF YHSPISKL
Arabidopsis Description
AT3g61200/T20K12_100 [Source:UniProtKB/TrEMBL;Acc:Q9M2E4]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.