Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G162200.1 | Wheat | cytosol | 85.14 | 85.14 |
| TraesCS3B01G181100.1 | Wheat | cytosol, mitochondrion, nucleus | 92.0 | 69.7 |
| Zm00001d039303_P001 | Maize | peroxisome | 53.14 | 57.06 |
| EES15320 | Sorghum | cytosol | 53.71 | 53.71 |
| TraesCS3A01G154700.1 | Wheat | peroxisome | 46.29 | 49.39 |
| KXG31495 | Sorghum | peroxisome | 53.14 | 45.59 |
| CDY70889 | Canola | cytosol, peroxisome | 12.0 | 36.21 |
| TraesCS5A01G368100.1 | Wheat | extracellular | 16.0 | 30.77 |
| TraesCS5A01G368200.1 | Wheat | peroxisome | 26.86 | 30.52 |
| TraesCS2A01G306200.1 | Wheat | peroxisome | 25.71 | 30.2 |
| TraesCS5A01G029400.1 | Wheat | peroxisome | 27.43 | 29.81 |
| CDY28372 | Canola | peroxisome | 26.29 | 29.11 |
| Bra021167.1-P | Field mustard | cytosol | 25.71 | 28.48 |
| CDY20186 | Canola | cytosol | 25.71 | 28.48 |
| AT3G16175.1 | Thale cress | cytosol | 24.0 | 26.75 |
| CDX87876 | Canola | peroxisome | 23.43 | 25.95 |
| Bra014316.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 23.43 | 25.95 |
| KRH44334 | Soybean | peroxisome | 23.43 | 25.95 |
| AT1G52191.1 | Thale cress | cytosol, extracellular, golgi | 20.0 | 25.36 |
| TraesCS4A01G179200.1 | Wheat | cytosol | 23.43 | 22.04 |
| KRH47262 | Soybean | cytosol | 13.71 | 19.67 |
| TraesCS4A01G179300.1 | Wheat | cytosol, mitochondrion, plastid | 19.43 | 18.28 |
| VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 28.0 | 16.28 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G154800.1 | EnsemblPlantsGene:TraesCS3A01G154800 | Gene3D:3.10.129.10 | InterPro:HotDog_dom_sf | InterPro:Thioestr_dom | PANTHER:PTHR21660 |
| PANTHER:PTHR21660:SF16 | PFAM:PF03061 | SEG:seg | SUPFAM:SSF54637 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr3A:+:146562266..146563020
Molecular Weight (calculated)
18525.2 Da
IEP (calculated)
9.615
GRAVY (calculated)
-0.064
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDGAAEAEA LRLRLAAVAR KWLEDPRADY AGKITDAASQ KGHALNSLVL AGARISLSEH GRVVCSFHVP PPLTDSDGTW HAGALAAAAD NMCSAVVFTV
101: VGAPTSTVHY GLSYFSPVAC NEEVQLDGRV VGRKGKLTAA VVRVRKMGSG ELVAIGRQWM TPAWPTKSNK SRSKL
101: VGAPTSTVHY GLSYFSPVAC NEEVQLDGRV VGRKGKLTAA VVRVRKMGSG ELVAIGRQWM TPAWPTKSNK SRSKL
001: MFLFILEGLQ VIHVGRGIVR CKLTVTHHVL NEDGTLHTAA IGVLMELMGA IAIYSAGGSH TSVDLNYSLY STAKIQEEIK IEARVVGKRS ENLNSAIIEI
101: RREYEEELIA TGRLWMSLLK TPFSLNVKHN GVDQVSKL
101: RREYEEELIA TGRLWMSLLK TPFSLNVKHN GVDQVSKL
Arabidopsis Description
Thioesterase superfamily protein [Source:UniProtKB/TrEMBL;Acc:B3H4T3]
SUBAcon: [golgi,extracellular,cytosol]
SUBAcon: [golgi,extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.