Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70889 | Canola | cytosol, peroxisome | 25.95 | 70.69 |
| AT1G52191.1 | Thale cress | cytosol, extracellular, golgi | 57.59 | 65.94 |
| CDY28372 | Canola | peroxisome | 55.7 | 55.7 |
| CDY20186 | Canola | cytosol | 54.43 | 54.43 |
| KRH44334 | Soybean | peroxisome | 34.18 | 34.18 |
| KRH47262 | Soybean | cytosol | 22.15 | 28.69 |
| Zm00001d030077_P001 | Maize | peroxisome | 15.82 | 28.41 |
| Os01t0229500-01 | Rice | plastid | 29.75 | 28.14 |
| Zm00001d008999_P001 | Maize | peroxisome, plastid | 28.48 | 27.78 |
| TraesCS3A01G154700.1 | Wheat | peroxisome | 28.48 | 27.44 |
| Zm00001d052281_P001 | Maize | peroxisome | 27.85 | 27.16 |
| Zm00001d006909_P001 | Maize | peroxisome | 27.85 | 27.16 |
| Zm00001d002652_P001 | Maize | peroxisome, plastid | 27.85 | 27.16 |
| TraesCS3D01G162100.1 | Wheat | peroxisome | 28.48 | 27.11 |
| EES02196 | Sorghum | plastid | 27.85 | 26.99 |
| TraesCS3B01G181000.1 | Wheat | peroxisome | 27.85 | 26.51 |
| EES15320 | Sorghum | cytosol | 28.48 | 25.71 |
| CDY18217 | Canola | peroxisome | 24.68 | 25.32 |
| CDX86643 | Canola | cytosol | 25.32 | 25.0 |
| CDY15497 | Canola | cytosol | 25.32 | 25.0 |
| Zm00001d039303_P001 | Maize | peroxisome | 25.32 | 24.54 |
| CDY45458 | Canola | peroxisome | 24.68 | 24.53 |
| Zm00001d005676_P002 | Maize | peroxisome | 28.48 | 24.32 |
| TraesCS3A01G154800.1 | Wheat | peroxisome | 25.95 | 23.43 |
| CDX89829 | Canola | cytosol | 22.78 | 23.38 |
| CDY53360 | Canola | peroxisome | 23.42 | 23.27 |
| TraesCS3D01G162200.1 | Wheat | cytosol | 24.68 | 22.29 |
| VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 39.87 | 20.93 |
| KXG31495 | Sorghum | peroxisome | 25.95 | 20.1 |
| TraesCS3B01G181100.1 | Wheat | cytosol, mitochondrion, nucleus | 25.32 | 17.32 |
Protein Annotations
| EnsemblPlants:CDX87876 | EnsemblPlantsGene:GSBRNA2T00147102001 | Gene3D:3.10.129.10 | InterPro:HotDog_dom_sf | InterPro:Thioestr_dom | PANTHER:PTHR21660 |
| PANTHER:PTHR21660:SF16 | PFAM:PF03061 | ProteinID:CDX87876 | ProteinID:CDX87876.1 | SUPFAM:SSF54637 | UniParc:UPI0004EB2B3B |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC06g09380D
Coordinates
chrLK031852:-:1161672..1162682
Molecular Weight (calculated)
17538.1 Da
IEP (calculated)
6.149
GRAVY (calculated)
-0.072
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSAILRVT TYLEELSNVR FDHFPGLILQ GLQVIHVGKG FVQCKLIITD RVLGEDGTFH TGVIAALMEL IGATAIYSDG GSHSHASIDL NYSLYSTAKN
101: KEEVKIEARV VGRKEDLNSA VIEIRREYDE ELIAMGRLRM VQLSLSDKHN GVHQASKL
101: KEEVKIEARV VGRKEDLNSA VIEIRREYDE ELIAMGRLRM VQLSLSDKHN GVHQASKL
001: MFLFILEGLQ VIHVGRGIVR CKLTVTHHVL NEDGTLHTAA IGVLMELMGA IAIYSAGGSH TSVDLNYSLY STAKIQEEIK IEARVVGKRS ENLNSAIIEI
101: RREYEEELIA TGRLWMSLLK TPFSLNVKHN GVDQVSKL
101: RREYEEELIA TGRLWMSLLK TPFSLNVKHN GVDQVSKL
Arabidopsis Description
Thioesterase superfamily protein [Source:UniProtKB/TrEMBL;Acc:B3H4T3]
SUBAcon: [golgi,extracellular,cytosol]
SUBAcon: [golgi,extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.