Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89829 | Canola | cytosol | 86.36 | 86.36 |
| CDY15497 | Canola | cytosol | 81.82 | 78.75 |
| AT1G04290.1 | Thale cress | cytosol | 79.22 | 78.71 |
| CDX86643 | Canola | cytosol | 78.57 | 75.62 |
| VIT_07s0130g00140.t01 | Wine grape | cytosol | 66.23 | 66.23 |
| PGSC0003DMT400059405 | Potato | cytosol | 64.94 | 65.36 |
| Solyc09g005390.2.1 | Tomato | cytosol | 62.99 | 63.4 |
| KRH63917 | Soybean | cytosol | 64.29 | 61.49 |
| VIT_07s0130g00150.t01 | Wine grape | peroxisome | 57.79 | 57.79 |
| KRH63916 | Soybean | peroxisome | 46.75 | 51.43 |
| TraesCS5D01G037100.1 | Wheat | peroxisome | 52.6 | 50.31 |
| TraesCS1B01G365900.1 | Wheat | peroxisome | 51.3 | 49.38 |
| TraesCS5A01G029400.1 | Wheat | peroxisome | 51.3 | 49.07 |
| TraesCS5B01G028000.1 | Wheat | peroxisome | 50.65 | 48.45 |
| EES19410 | Sorghum | peroxisome | 50.65 | 47.85 |
| Zm00001d026704_P001 | Maize | peroxisome | 48.05 | 42.53 |
| GSMUA_Achr9P00370_001 | Banana | mitochondrion | 53.9 | 40.29 |
| HORVU5Hr1G007830.6 | Barley | extracellular, peroxisome | 40.91 | 31.5 |
| CDY53360 | Canola | peroxisome | 32.47 | 31.45 |
| CDY45458 | Canola | peroxisome | 32.47 | 31.45 |
| CDY20186 | Canola | cytosol | 26.62 | 25.95 |
| CDY70889 | Canola | cytosol, peroxisome | 9.74 | 25.86 |
| CDY28372 | Canola | peroxisome | 25.97 | 25.32 |
| CDX87876 | Canola | peroxisome | 25.32 | 24.68 |
Protein Annotations
| EnsemblPlants:CDY18217 | EnsemblPlantsGene:GSBRNA2T00002746001 | Gene3D:3.10.129.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| GO:GO:0047617 | InterPro:HotDog_dom_sf | InterPro:PAAI_dom | InterPro:Thioestr_dom | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF15 |
| PFAM:PF03061 | ProteinID:CDY18217 | ProteinID:CDY18217.1 | SEG:seg | SUPFAM:SSF54637 | TIGRFAMs:TIGR00369 |
| UniParc:UPI0004EE9F8E | UniProt:A0A078FZM3 | MapMan:35.2 | : | : | : |
Description
BnaC05g02400DBnaC05g02400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZM3]
Coordinates
chrLK032083:-:375916..376760
Molecular Weight (calculated)
16749.4 Da
IEP (calculated)
9.040
GRAVY (calculated)
-0.012
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLELVKQYL EGDKKDEDES KVANLPPRFI ERFVAKGIKV DLIEPGRIVC SMKVQPHLLN AGSFLHGGAT ATLVDLIGSA VIFTTGVSSS GVSVEINVSY
101: LDSAFLDEEI EIESKALRVG KAVAVVSVEL RKKKDGKLIA QGRHTKYLAP RSKL
101: LDSAFLDEEI EIESKALRVG KAVAVVSVEL RKKKDGKLIA QGRHTKYLAP RSKL
001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
Arabidopsis Description
F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.