Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0130g00140.t01 | Wine grape | cytosol | 63.35 | 66.23 |
| AT1G04290.1 | Thale cress | cytosol | 63.35 | 65.81 |
| Bra015301.1-P | Field mustard | cytosol | 62.11 | 64.94 |
| CDY18217 | Canola | peroxisome | 61.49 | 64.29 |
| CDX89829 | Canola | cytosol | 60.25 | 62.99 |
| VIT_07s0130g00150.t01 | Wine grape | peroxisome | 60.25 | 62.99 |
| PGSC0003DMT400059405 | Potato | cytosol | 57.76 | 60.78 |
| Solyc09g005390.2.1 | Tomato | cytosol | 56.52 | 59.48 |
| CDY15497 | Canola | cytosol | 59.01 | 59.38 |
| Bra030563.1-P | Field mustard | cytosol | 59.01 | 59.38 |
| CDX86643 | Canola | cytosol | 58.39 | 58.75 |
| KRH63916 | Soybean | peroxisome | 47.2 | 54.29 |
| TraesCS1B01G365900.1 | Wheat | peroxisome | 45.34 | 45.62 |
| TraesCS5D01G037100.1 | Wheat | peroxisome | 44.72 | 44.72 |
| TraesCS5B01G028000.1 | Wheat | peroxisome | 44.72 | 44.72 |
| TraesCS5A01G029400.1 | Wheat | peroxisome | 44.1 | 44.1 |
| EES19410 | Sorghum | peroxisome | 43.48 | 42.94 |
| GSMUA_Achr9P00370_001 | Banana | mitochondrion | 52.17 | 40.78 |
| Zm00001d026704_P001 | Maize | peroxisome | 43.48 | 40.23 |
| KRH16998 | Soybean | cytosol, nucleus, peroxisome | 21.74 | 34.31 |
| KRH72635 | Soybean | mitochondrion | 30.43 | 30.82 |
| HORVU5Hr1G007830.6 | Barley | extracellular, peroxisome | 37.27 | 30.0 |
| KRH44334 | Soybean | peroxisome | 22.36 | 22.78 |
| KRH47262 | Soybean | cytosol | 13.66 | 18.03 |
Protein Annotations
| EntrezGene:100805426 | Gene3D:3.10.129.10 | MapMan:35.2 | EMBL:ACUP02002728 | EnsemblPlantsGene:GLYMA_04G204300 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0016787 |
| GO:GO:0047617 | InterPro:HotDog_dom_sf | UniProt:I1JXU2 | EnsemblPlants:KRH63917 | ProteinID:KRH63917 | ProteinID:KRH63917.1 |
| InterPro:PAAI_dom | PFAM:PF03061 | PANTHER:PTHR21660 | SUPFAM:SSF54637 | TIGRFAMs:TIGR00369 | InterPro:Thioestr_dom |
| UniParc:UPI00023BF783 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:47665266..47666746
Molecular Weight (calculated)
17120.0 Da
IEP (calculated)
9.442
GRAVY (calculated)
0.207
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLEAVKRYL EKGGETASAV DGLPPRFLEP LIMNALKVDL IETGRVVCSM KIPPRLLNAG NSLHGGAIAA LVDVVGSAAI PTVGYSAPNT GVSVEINVSY
101: LDAAYADVSR LLSLEEIEIE ARALRVGKAV AVISVEFKKK KTGKVFAQGR HTKFLPLSSK M
101: LDAAYADVSR LLSLEEIEIE ARALRVGKAV AVISVEFKKK KTGKVFAQGR HTKFLPLSSK M
001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
Arabidopsis Description
F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.