Factsheet for HORVU5Hr1G007830.6

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, peroxisome
Any Predictor:	peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G028000.1	Wheat	peroxisome	52.5	65.22
TraesCS5A01G029400.1	Wheat	peroxisome	52.0	64.6
TraesCS5D01G037100.1	Wheat	peroxisome	51.0	63.35
TraesCS1B01G365900.1	Wheat	peroxisome	50.0	62.5
EES19410	Sorghum	peroxisome	46.5	57.06
Zm00001d026704_P001	Maize	peroxisome	46.0	52.87
AT1G04290.1	Thale cress	cytosol	34.5	44.52
VIT_07s0130g00140.t01	Wine grape	cytosol	33.5	43.51
Solyc09g005390.2.1	Tomato	cytosol	32.0	41.83
Bra015301.1-P	Field mustard	cytosol	32.0	41.56
GSMUA_Achr9P00370_001	Banana	mitochondrion	42.5	41.26
CDY18217	Canola	peroxisome	31.5	40.91
VIT_07s0130g00150.t01	Wine grape	peroxisome	31.5	40.91
PGSC0003DMT400059405	Potato	cytosol	31.0	40.52
CDX89829	Canola	cytosol	31.0	40.26
CDX86643	Canola	cytosol	31.5	39.38
CDY15497	Canola	cytosol	31.0	38.75
Bra030563.1-P	Field mustard	cytosol	31.0	38.75
KRH63916	Soybean	peroxisome	26.5	37.86
KRH63917	Soybean	cytosol	30.0	37.27
HORVU2Hr1G125430.2	Barley	cytosol, peroxisome	27.5	35.26
HORVU2Hr1G076160.3	Barley	cytosol	13.5	21.6
HORVU4Hr1G027140.2	Barley	cytosol	12.0	19.67
HORVU4Hr1G027080.1	Barley	plastid	16.5	18.03

Protein Annotations

EnsemblPlants:HORVU5Hr1G007830.6	EnsemblPlantsGene:HORVU5Hr1G007830	Gene3D:3.10.129.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0047617	InterPro:HotDog_dom_sf	InterPro:PAAI_dom	InterPro:Thioestr_dom	PANTHER:PTHR21660	PANTHER:PTHR21660:SF15
PFAM:PF03061	SEG:seg	SUPFAM:SSF54637	TIGRFAMs:TIGR00369	UniParc:UPI000B46E5F0	UniProt:A0A287Q9V8
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:16494763..16496338

Molecular Weight (calculated)

20576.8 Da

IEP (calculated)

10.870

GRAVY (calculated)

-0.121

Length

200 amino acids

Sequence
(BLAST)

001: SQRNGIGEGN AIPYPFLFLG PADGVGVGVG GGFGEGSAAA GGGGGRVAAG GAGGRAALRL LRRLRALRHP RPRRRARPPP LPLHRPRPPP LLFADDGCVV
101: VAEQPQNSGN FLHGGATASL VDLVGTAVFY TAGAQTRGSP LEMNISYLDA AFSDEEIDIE AKVLRAGKAV GVATVELKKK SGKIIAQARY SKYLGASSKL

Best Arabidopsis Sequence Match ( AT1G04290.1 )
(BLAST)

001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL

Arabidopsis Description

F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.