Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 3
- mitochondrion 1
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0130g00150.t01 | Wine grape | peroxisome | 75.97 | 75.97 |
| CDY18217 | Canola | peroxisome | 66.23 | 66.23 |
| AT1G04290.1 | Thale cress | cytosol | 65.58 | 65.16 |
| Bra015301.1-P | Field mustard | cytosol | 64.94 | 64.94 |
| PGSC0003DMT400059405 | Potato | cytosol | 64.29 | 64.71 |
| Solyc09g005390.2.1 | Tomato | cytosol | 63.64 | 64.05 |
| KRH63917 | Soybean | cytosol | 66.23 | 63.35 |
| CDX89829 | Canola | cytosol | 62.99 | 62.99 |
| CDY15497 | Canola | cytosol | 62.34 | 60.0 |
| Bra030563.1-P | Field mustard | cytosol | 62.34 | 60.0 |
| CDX86643 | Canola | cytosol | 61.04 | 58.75 |
| KRH63916 | Soybean | peroxisome | 51.95 | 57.14 |
| TraesCS5D01G037100.1 | Wheat | peroxisome | 54.55 | 52.17 |
| TraesCS1B01G365900.1 | Wheat | peroxisome | 53.9 | 51.88 |
| EES19410 | Sorghum | peroxisome | 54.55 | 51.53 |
| TraesCS5A01G029400.1 | Wheat | peroxisome | 53.25 | 50.93 |
| TraesCS5B01G028000.1 | Wheat | peroxisome | 52.6 | 50.31 |
| Zm00001d026704_P001 | Maize | peroxisome | 53.25 | 47.13 |
| GSMUA_Achr9P00370_001 | Banana | mitochondrion | 61.69 | 46.12 |
| VIT_06s0004g06050.t01 | Wine grape | cytosol | 35.06 | 34.18 |
| HORVU5Hr1G007830.6 | Barley | extracellular, peroxisome | 43.51 | 33.5 |
| VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 31.17 | 15.95 |
Protein Annotations
| EntrezGene:100245883 | wikigene:100245883 | Gene3D:3.10.129.10 | MapMan:35.2 | ProteinID:CBI27696 | ProteinID:CBI27696.3 |
| UniProt:D7TB23 | EMBL:FN595755 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf | EntrezGene:LOC100245883 |
| wikigene:LOC100245883 | InterPro:PAAI_dom | PFAM:PF03061 | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF15 | SUPFAM:SSF54637 |
| TIGR:TC57548 | TIGRFAMs:TIGR00369 | InterPro:Thioestr_dom | UniParc:UPI00015CC57D | ArrayExpress:VIT_07s0130g00140 | EnsemblPlantsGene:VIT_07s0130g00140 |
| EnsemblPlants:VIT_07s0130g00140.t01 | unigene:Vvi.5941 | RefSeq:XP_002271479 | RefSeq:XP_002271479.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr7:-:20419753..20422900
Molecular Weight (calculated)
16661.3 Da
IEP (calculated)
8.225
GRAVY (calculated)
0.044
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLESVKRLL ENGQGTENES SINSLPTRLF DPFILQGLHV DLVEPGRLIC SMKVPPRLLN NGNFLHGGAM ASLVDLVGSA AIFSTGAPNS GVSVEINVSY
101: LDAAYADEEI EIECKVLRVG KSVGVVSVEI RKKKTGKIIA QGRHTKYLLV RSKI
101: LDAAYADEEI EIECKVLRVG KSVGVVSVEI RKKKTGKIIA QGRHTKYLLV RSKI
001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
Arabidopsis Description
F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.