Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18217 | Canola | peroxisome | 78.71 | 79.22 |
| Bra015301.1-P | Field mustard | cytosol | 77.42 | 77.92 |
| CDX89829 | Canola | cytosol | 76.77 | 77.27 |
| CDX86643 | Canola | cytosol | 76.13 | 73.75 |
| Bra030563.1-P | Field mustard | cytosol | 74.19 | 71.88 |
| CDY15497 | Canola | cytosol | 74.19 | 71.88 |
| PGSC0003DMT400059405 | Potato | cytosol | 65.81 | 66.67 |
| Solyc09g005390.2.1 | Tomato | cytosol | 65.16 | 66.01 |
| VIT_07s0130g00140.t01 | Wine grape | cytosol | 65.16 | 65.58 |
| KRH63917 | Soybean | cytosol | 65.81 | 63.35 |
| VIT_07s0130g00150.t01 | Wine grape | peroxisome | 58.71 | 59.09 |
| KRH63916 | Soybean | peroxisome | 48.39 | 53.57 |
| TraesCS5D01G037100.1 | Wheat | peroxisome | 53.55 | 51.55 |
| TraesCS1B01G365900.1 | Wheat | peroxisome | 52.9 | 51.25 |
| TraesCS5A01G029400.1 | Wheat | peroxisome | 52.26 | 50.31 |
| TraesCS5B01G028000.1 | Wheat | peroxisome | 52.26 | 50.31 |
| EES19410 | Sorghum | peroxisome | 49.68 | 47.24 |
| GSMUA_Achr9P00370_001 | Banana | mitochondrion | 60.65 | 45.63 |
| Zm00001d026704_P001 | Maize | peroxisome | 48.39 | 43.1 |
| HORVU5Hr1G007830.6 | Barley | extracellular, peroxisome | 44.52 | 34.5 |
| AT2G29590.1 | Thale cress | cytosol | 32.26 | 31.65 |
| AT1G52191.1 | Thale cress | cytosol, extracellular, golgi | 24.52 | 27.54 |
| AT3G16175.1 | Thale cress | cytosol | 23.23 | 22.93 |
Protein Annotations
| Gene3D:3.10.129.10 | MapMan:35.2 | EntrezGene:839552 | UniProt:A0A178W7W7 | ProteinID:AAB70447.1 | ProteinID:AEE27679.1 |
| ArrayExpress:AT1G04290 | EnsemblPlantsGene:AT1G04290 | RefSeq:AT1G04290 | TAIR:AT1G04290 | RefSeq:AT1G04290-TAIR-G | EnsemblPlants:AT1G04290.1 |
| TAIR:AT1G04290.1 | EMBL:AY088612 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0008150 | GO:GO:0016787 | GO:GO:0047617 |
| InterPro:HotDog_dom_sf | RefSeq:NP_563705.1 | ProteinID:OAP13615.1 | UniProt:P93828 | InterPro:PAAI_dom | PFAM:PF03061 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF15 |
| SUPFAM:SSF54637 | TIGRFAMs:TIGR00369 | InterPro:Thioestr_dom | UniParc:UPI000009C90A | : | : |
Description
F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
Coordinates
chr1:-:1147297..1148533
Molecular Weight (calculated)
16887.6 Da
IEP (calculated)
8.462
GRAVY (calculated)
-0.026
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.