Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018375.1-P | Field mustard | peroxisome | 70.25 | 69.81 |
| CDY45458 | Canola | peroxisome | 68.35 | 67.92 |
| CDY53360 | Canola | peroxisome | 67.72 | 67.3 |
| KRH16998 | Soybean | cytosol, nucleus, peroxisome | 39.87 | 61.76 |
| PGSC0003DMT400078213 | Potato | cytosol, peroxisome, plastid | 56.96 | 56.96 |
| KRH72635 | Soybean | mitochondrion | 56.33 | 55.97 |
| Solyc06g076690.2.1 | Tomato | cytosol, peroxisome, plastid | 55.06 | 55.06 |
| VIT_06s0004g06050.t01 | Wine grape | cytosol | 53.8 | 53.8 |
| GSMUA_Achr5P28830_001 | Banana | cytosol | 50.0 | 50.0 |
| Solyc06g076680.2.1 | Tomato | cytosol, nucleus, peroxisome | 46.2 | 46.2 |
| PGSC0003DMT400078209 | Potato | cytosol | 46.2 | 42.94 |
| HORVU4Hr1G027140.2 | Barley | cytosol | 31.65 | 40.98 |
| EES10320 | Sorghum | cytosol | 43.67 | 38.76 |
| Zm00001d048584_P001 | Maize | cytosol | 41.14 | 38.46 |
| HORVU4Hr1G027080.1 | Barley | plastid | 43.67 | 37.7 |
| TraesCS4D01G134100.1 | Wheat | cytosol | 44.3 | 37.63 |
| TraesCS4A01G179200.1 | Wheat | cytosol | 43.67 | 37.1 |
| Os02t0521700-01 | Rice | cytosol | 41.77 | 36.26 |
| TraesCS4D01G134200.1 | Wheat | cytosol | 41.77 | 35.48 |
| TraesCS4B01G139500.1 | Wheat | plastid | 41.14 | 34.95 |
| TraesCS4A01G179300.1 | Wheat | cytosol, mitochondrion, plastid | 40.51 | 34.41 |
| AT1G04290.1 | Thale cress | cytosol | 31.65 | 32.26 |
| TraesCS4B01G139400.1 | Wheat | mitochondrion | 43.67 | 29.87 |
| AT3G16175.1 | Thale cress | cytosol | 25.95 | 26.11 |
| AT1G52191.1 | Thale cress | cytosol, extracellular, golgi | 22.78 | 26.09 |
Protein Annotations
| Gene3D:3.10.129.10 | MapMan:35.2 | EntrezGene:817508 | UniProt:A0A178W0M1 | ProteinID:AAC95180.2 | ProteinID:AEC08276.1 |
| EMBL:AK117981 | ArrayExpress:AT2G29590 | EnsemblPlantsGene:AT2G29590 | RefSeq:AT2G29590 | TAIR:AT2G29590 | RefSeq:AT2G29590-TAIR-G |
| EnsemblPlants:AT2G29590.1 | TAIR:AT2G29590.1 | Unigene:At.43928 | EMBL:BT003678 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0008150 |
| GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf | RefSeq:NP_565683.1 | ProteinID:OAP11634.1 | PFAM:PF03061 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR21660 | PANTHER:PTHR21660:SF8 | UniProt:Q9ZW37 | SUPFAM:SSF54637 | InterPro:Thioestr_dom | UniParc:UPI000000C0FA |
Description
At2g29590 [Source:UniProtKB/TrEMBL;Acc:Q9ZW37]
Coordinates
chr2:-:12654456..12655457
Molecular Weight (calculated)
17369.0 Da
IEP (calculated)
5.081
GRAVY (calculated)
-0.134
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEKIMEYLQ LSDEVVDDGE APRVEEFLGE GKSFYENFSL RGIRVNRVEP GFISCSFKVP LRLTDRDKNL ANGAIANLVD EVGGALVHGE GLPMSVSVDM
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.