Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
- mitochondrion 1
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G134100.1 | Wheat | cytosol | 93.99 | 92.47 |
| TraesCS4A01G179200.1 | Wheat | cytosol | 85.79 | 84.41 |
| HORVU4Hr1G027140.2 | Barley | cytosol | 51.37 | 77.05 |
| TraesCS4B01G139400.1 | Wheat | mitochondrion | 74.32 | 58.87 |
| Zm00001d048584_P001 | Maize | cytosol | 53.55 | 57.99 |
| EES10320 | Sorghum | cytosol | 51.91 | 53.37 |
| Os02t0521700-01 | Rice | cytosol | 51.37 | 51.65 |
| KRH16998 | Soybean | cytosol, nucleus, peroxisome | 26.78 | 48.04 |
| CDY45458 | Canola | peroxisome | 39.34 | 45.28 |
| KRH72635 | Soybean | mitochondrion | 38.8 | 44.65 |
| Bra018375.1-P | Field mustard | peroxisome | 38.8 | 44.65 |
| CDY53360 | Canola | peroxisome | 38.25 | 44.03 |
| AT2G29590.1 | Thale cress | cytosol | 37.7 | 43.67 |
| PGSC0003DMT400078213 | Potato | cytosol, peroxisome, plastid | 37.7 | 43.67 |
| GSMUA_Achr5P28830_001 | Banana | cytosol | 37.16 | 43.04 |
| Solyc06g076690.2.1 | Tomato | cytosol, peroxisome, plastid | 36.61 | 42.41 |
| VIT_06s0004g06050.t01 | Wine grape | cytosol | 36.61 | 42.41 |
| Solyc06g076680.2.1 | Tomato | cytosol, nucleus, peroxisome | 34.43 | 39.87 |
| PGSC0003DMT400078209 | Potato | cytosol | 34.43 | 37.06 |
| HORVU2Hr1G125430.2 | Barley | cytosol, peroxisome | 23.5 | 27.56 |
| HORVU2Hr1G076160.3 | Barley | cytosol | 16.94 | 24.8 |
| HORVU5Hr1G007830.6 | Barley | extracellular, peroxisome | 18.03 | 16.5 |
Protein Annotations
| EMBL:AK363662 | EnsemblPlants:HORVU4Hr1G027080.1 | EnsemblPlantsGene:HORVU4Hr1G027080 | Gene3D:3.10.129.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF8 | SEG:seg |
| SUPFAM:SSF54637 | UniParc:UPI00020064AC | UniProt:F2DIE4 | MapMan:35.2 | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DIE4]
Coordinates
chrchr4H:+:164768055..164770062
Molecular Weight (calculated)
18829.4 Da
IEP (calculated)
9.806
GRAVY (calculated)
0.050
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSPELARA RGVLSVSADD HARVGALSSA ASLSPATTHL SPSFFEGFAL RGIRVLRLHP GFIHCSYTVP PGLTDSTTGC LAAGAVVALV DEIGSAASIS
101: QGQNLKVSVD MSVAFPDLSQ ARPGDRLSIT ARALGHKGAY SGTHVLFTNA ATGNVVAEGR HSLFGNMKKS PPKPAATTHR SNL
101: QGQNLKVSVD MSVAFPDLSQ ARPGDRLSIT ARALGHKGAY SGTHVLFTNA ATGNVVAEGR HSLFGNMKKS PPKPAATTHR SNL
001: MMEKIMEYLQ LSDEVVDDGE APRVEEFLGE GKSFYENFSL RGIRVNRVEP GFISCSFKVP LRLTDRDKNL ANGAIANLVD EVGGALVHGE GLPMSVSVDM
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL
Arabidopsis Description
At2g29590 [Source:UniProtKB/TrEMBL;Acc:Q9ZW37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.