Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G306200.1 | Wheat | peroxisome | 80.8 | 67.79 |
| TraesCS2D01G304600.1 | Wheat | peroxisome | 80.8 | 67.79 |
| TraesCS2B01G322900.1 | Wheat | peroxisome | 75.2 | 63.09 |
| Os04t0436100-01 | Rice | cytosol | 60.8 | 49.67 |
| Zm00001d025445_P001 | Maize | extracellular | 60.8 | 49.35 |
| OQU81612 | Sorghum | cytosol, nucleus, peroxisome | 60.0 | 48.7 |
| Zm00001d003630_P001 | Maize | extracellular | 60.0 | 48.7 |
| HORVU2Hr1G125430.2 | Barley | cytosol, peroxisome | 31.2 | 25.0 |
| HORVU4Hr1G027140.2 | Barley | cytosol | 17.6 | 18.03 |
| HORVU4Hr1G027080.1 | Barley | plastid | 24.8 | 16.94 |
| HORVU5Hr1G007830.6 | Barley | extracellular, peroxisome | 21.6 | 13.5 |
| GSMUA_Achr10P... | Banana | peroxisome | 38.4 | 10.74 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G076160.3 | EnsemblPlantsGene:HORVU2Hr1G076160 | Gene3D:3.10.129.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| GO:GO:0047617 | InterPro:HotDog_dom_sf | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF15 | SEG:seg | SUPFAM:SSF54637 |
| UniParc:UPI000B4888CF | UniProt:A0A287II03 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:548942500..548944422
Molecular Weight (calculated)
13148.8 Da
IEP (calculated)
4.610
GRAVY (calculated)
0.561
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDAVRRTL EPTASPADIS GSTPYDSFVI SGVRLEAAEH GRVLCSFVVT PRIASPQGYL LSGVTASLAD QLGSAVFFSS GVGTSGVSLE ISVSYVDTAA
101: IGVRLQFLSP LLRLQTLILF VINIF
101: IGVRLQFLSP LLRLQTLILF VINIF
001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
Arabidopsis Description
F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.