Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53360 | Canola | peroxisome | 95.6 | 95.6 |
| AT2G29590.1 | Thale cress | cytosol | 69.81 | 70.25 |
| PGSC0003DMT400078213 | Potato | cytosol, peroxisome, plastid | 63.52 | 63.92 |
| Solyc06g076690.2.1 | Tomato | cytosol, peroxisome, plastid | 62.26 | 62.66 |
| KRH16998 | Soybean | cytosol, nucleus, peroxisome | 39.62 | 61.76 |
| KRH72635 | Soybean | mitochondrion | 61.01 | 61.01 |
| VIT_06s0004g06050.t01 | Wine grape | cytosol | 52.2 | 52.53 |
| Solyc06g076680.2.1 | Tomato | cytosol, nucleus, peroxisome | 50.31 | 50.63 |
| PGSC0003DMT400078209 | Potato | cytosol | 51.57 | 48.24 |
| GSMUA_Achr5P28830_001 | Banana | cytosol | 47.17 | 47.47 |
| HORVU4Hr1G027140.2 | Barley | cytosol | 32.08 | 41.8 |
| TraesCS4A01G179200.1 | Wheat | cytosol | 45.91 | 39.25 |
| HORVU4Hr1G027080.1 | Barley | plastid | 44.65 | 38.8 |
| TraesCS4D01G134100.1 | Wheat | cytosol | 45.28 | 38.71 |
| Zm00001d048584_P001 | Maize | cytosol | 40.88 | 38.46 |
| Os02t0521700-01 | Rice | cytosol | 43.4 | 37.91 |
| TraesCS4D01G134200.1 | Wheat | cytosol | 42.77 | 36.56 |
| TraesCS4A01G179300.1 | Wheat | cytosol, mitochondrion, plastid | 41.51 | 35.48 |
| TraesCS4B01G139500.1 | Wheat | plastid | 41.51 | 35.48 |
| EES10320 | Sorghum | cytosol | 39.62 | 35.39 |
| Bra015301.1-P | Field mustard | cytosol | 32.7 | 33.77 |
| TraesCS4B01G139400.1 | Wheat | mitochondrion | 45.91 | 31.6 |
| Bra030563.1-P | Field mustard | cytosol | 30.82 | 30.62 |
| Bra021167.1-P | Field mustard | cytosol | 27.04 | 27.22 |
| Bra014316.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 22.64 | 22.78 |
Protein Annotations
| EnsemblPlants:Bra018375.1 | EnsemblPlants:Bra018375.1-P | EnsemblPlantsGene:Bra018375 | Gene3D:3.10.129.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0016787 |
| GO:GO:0047617 | InterPro:HotDog_dom_sf | InterPro:Thioestr_dom | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF8 | PFAM:PF03061 |
| SEG:seg | SUPFAM:SSF54637 | UniParc:UPI0002547D5B | UniProt:M4DPD4 | MapMan:35.2 | : |
Description
AT2G29590 (E=3e-062) | thioesterase family protein
Coordinates
chrA05:+:7834722..7835414
Molecular Weight (calculated)
17743.5 Da
IEP (calculated)
6.547
GRAVY (calculated)
-0.189
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MEERMIMEKI REHLYLSEDV DVSDAPRKVE KGRSFYEDFS LRGIRVNRVD PGFISCSFKV PLRLTDREGY LANGAIANLV DEVGGAVVYV EGLPMNVSVD
101: MSIAFLSKAK LGEELEITSR VMGERGGYKG TIVVVRNKMT GEIIAEGRHS LFGRQPSKL
101: MSIAFLSKAK LGEELEITSR VMGERGGYKG TIVVVRNKMT GEIIAEGRHS LFGRQPSKL
001: MMEKIMEYLQ LSDEVVDDGE APRVEEFLGE GKSFYENFSL RGIRVNRVEP GFISCSFKVP LRLTDRDKNL ANGAIANLVD EVGGALVHGE GLPMSVSVDM
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL
Arabidopsis Description
At2g29590 [Source:UniProtKB/TrEMBL;Acc:Q9ZW37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.