Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052281_P001 | Maize | peroxisome | 88.27 | 88.27 |
| Zm00001d006909_P001 | Maize | peroxisome | 88.27 | 88.27 |
| Zm00001d002652_P001 | Maize | peroxisome, plastid | 88.27 | 88.27 |
| Zm00001d030077_P001 | Maize | peroxisome | 46.3 | 85.23 |
| EES02196 | Sorghum | plastid | 82.1 | 81.6 |
| TraesCS3B01G181000.1 | Wheat | peroxisome | 77.78 | 75.9 |
| TraesCS3A01G154700.1 | Wheat | peroxisome | 76.54 | 75.61 |
| TraesCS3D01G162100.1 | Wheat | peroxisome | 77.16 | 75.3 |
| Zm00001d005676_P002 | Maize | peroxisome | 85.8 | 75.14 |
| Os01t0229500-01 | Rice | plastid | 73.46 | 71.26 |
| Zm00001d039303_P001 | Maize | peroxisome | 46.91 | 46.63 |
| CDY70889 | Canola | cytosol, peroxisome | 13.58 | 37.93 |
| KRH44334 | Soybean | peroxisome | 30.25 | 31.01 |
| CDY28372 | Canola | peroxisome | 29.63 | 30.38 |
| AT3G16175.1 | Thale cress | cytosol | 29.01 | 29.94 |
| Bra021167.1-P | Field mustard | cytosol | 29.01 | 29.75 |
| Zm00001d003630_P001 | Maize | extracellular | 27.78 | 29.22 |
| CDY20186 | Canola | cytosol | 28.4 | 29.11 |
| AT1G52191.1 | Thale cress | cytosol, extracellular, golgi | 24.69 | 28.99 |
| CDX87876 | Canola | peroxisome | 27.78 | 28.48 |
| Bra014316.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 27.78 | 28.48 |
| Zm00001d025445_P001 | Maize | extracellular | 26.54 | 27.92 |
| KRH47262 | Soybean | cytosol | 20.37 | 27.05 |
| Zm00001d026704_P001 | Maize | peroxisome | 25.93 | 24.14 |
| Zm00001d048584_P001 | Maize | cytosol | 24.07 | 23.08 |
| VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 37.65 | 20.27 |
Protein Annotations
| EnsemblPlants:Zm00001d008999_P001 | EnsemblPlants:Zm00001d008999_T001 | EnsemblPlantsGene:Zm00001d008999 | Gene3D:3.10.129.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0047617 | InterPro:HotDog_dom_sf | InterPro:Thioestr_dom | PANTHER:PTHR21660 | PANTHER:PTHR21660:SF16 |
| PFAM:PF03061 | ProteinID:AQK91172.1 | SEG:seg | SUPFAM:SSF54637 | UniParc:UPI0002217B81 | UniProt:K7VRF1 |
| MapMan:35.2 | : | : | : | : | : |
Description
Thioesterase superfamily protein
Coordinates
chr8:+:29415117..29416751
Molecular Weight (calculated)
17264.8 Da
IEP (calculated)
8.755
GRAVY (calculated)
-0.064
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAVEPPAWM SAAARRWLEN AGATAEDTPG RAFNALPLSG VRVSLAERGR ALCSLRVPPH LTDAEGNWHA GAIAAAADDV CAAAIMSVEG IIKVSVHYDI
101: SYFTPAKLHD EVEMDGRVVE HKGRMTAVVV EIRKKKSGEL VAIGRQWMTA SRPKGAAAHS KI
101: SYFTPAKLHD EVEMDGRVVE HKGRMTAVVV EIRKKKSGEL VAIGRQWMTA SRPKGAAAHS KI
001: MVDPTIHNTT TYLEEIAKGN GQTEFEILIL KGLELIHVGK GILRCKLLVT DHVVGEDGSW NAGVITAVMD SIGASAVYSS GGGLHISVDL NSSFYSTAKI
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
Arabidopsis Description
At3g16179/At3g16179 [Source:UniProtKB/TrEMBL;Acc:Q940V5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.