Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G162100.1 | Wheat | peroxisome | 98.19 | 98.19 |
| TraesCS3A01G154700.1 | Wheat | peroxisome | 95.18 | 96.34 |
| Zm00001d030077_P001 | Maize | peroxisome | 41.57 | 78.41 |
| Zm00001d008999_P001 | Maize | peroxisome, plastid | 75.9 | 77.78 |
| Zm00001d002652_P001 | Maize | peroxisome, plastid | 75.9 | 77.78 |
| EES02196 | Sorghum | plastid | 74.1 | 75.46 |
| Zm00001d052281_P001 | Maize | peroxisome | 73.49 | 75.31 |
| Zm00001d006909_P001 | Maize | peroxisome | 73.49 | 75.31 |
| Os01t0229500-01 | Rice | plastid | 70.48 | 70.06 |
| Zm00001d005676_P002 | Maize | peroxisome | 75.3 | 67.57 |
| TraesCS3B01G181100.1 | Wheat | cytosol, mitochondrion, nucleus | 49.4 | 35.5 |
| CDY70889 | Canola | cytosol, peroxisome | 12.05 | 34.48 |
| Bra021167.1-P | Field mustard | cytosol | 30.12 | 31.65 |
| CDY28372 | Canola | peroxisome | 30.12 | 31.65 |
| AT3G16175.1 | Thale cress | cytosol | 29.52 | 31.21 |
| KRH44334 | Soybean | peroxisome | 29.52 | 31.01 |
| CDY20186 | Canola | cytosol | 29.52 | 31.01 |
| AT1G52191.1 | Thale cress | cytosol, extracellular, golgi | 25.3 | 30.43 |
| TraesCS5B01G370500.2 | Wheat | peroxisome | 28.31 | 30.13 |
| TraesCS1B01G365900.1 | Wheat | peroxisome | 28.31 | 29.38 |
| TraesCS5B01G028000.1 | Wheat | peroxisome | 27.71 | 28.57 |
| CDX87876 | Canola | peroxisome | 26.51 | 27.85 |
| Bra014316.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 26.51 | 27.85 |
| KRH47262 | Soybean | cytosol | 18.67 | 25.41 |
| TraesCS2B01G322900.1 | Wheat | peroxisome | 22.29 | 24.83 |
| TraesCS4B01G139500.1 | Wheat | plastid | 23.49 | 20.97 |
| VIT_09s0002g04160.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 36.14 | 19.93 |
| TraesCS4B01G139400.1 | Wheat | mitochondrion | 24.7 | 17.75 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G181000.1 | EnsemblPlantsGene:TraesCS3B01G181000 | Gene3D:3.10.129.10 | InterPro:HotDog_dom_sf | InterPro:Thioestr_dom | PANTHER:PTHR21660 |
| PANTHER:PTHR21660:SF16 | PFAM:PF03061 | SEG:seg | SUPFAM:SSF54637 | TIGR:cd03443 | MapMan:35.2 |
Description
No Description!
Coordinates
chr3B:+:189384032..189385808
Molecular Weight (calculated)
17651.0 Da
IEP (calculated)
7.145
GRAVY (calculated)
-0.157
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDPAPPAWM AAAARKWLED AGAIAEDGAG AGDGRRAFNA LPLFGVRVSL AERGRAVCSL RVPAHLTDAD GNWHAGAIAA AVDDVCAAAI MSVEGIIKVS
101: VHYDISYFAP AKHHEEVEMD GRVVDQKGRM TAVTTEVRKK ESGELVAIGR QWMTTSRPKG YHGSKL
101: VHYDISYFAP AKHHEEVEMD GRVVDQKGRM TAVTTEVRKK ESGELVAIGR QWMTTSRPKG YHGSKL
001: MVDPTIHNTT TYLEEIAKGN GQTEFEILIL KGLELIHVGK GILRCKLLVT DHVVGEDGSW NAGVITAVMD SIGASAVYSS GGGLHISVDL NSSFYSTAKI
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
Arabidopsis Description
At3g16179/At3g16179 [Source:UniProtKB/TrEMBL;Acc:Q940V5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.