Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G276700.1 | Wheat | nucleus | 60.76 | 64.43 |
| TraesCS7D01G276700.1 | Wheat | nucleus | 61.39 | 63.4 |
| TraesCS7B01G174400.1 | Wheat | nucleus | 61.39 | 63.4 |
| OQU80725 | Sorghum | nucleus | 62.03 | 59.04 |
| Zm00001d031985_P001 | Maize | nucleus | 58.23 | 55.76 |
| HORVU7Hr1G058220.1 | Barley | plastid | 59.49 | 47.72 |
| PGSC0003DMT400048247 | Potato | nucleus, plastid | 29.75 | 30.32 |
| Bra006815.1-P | Field mustard | nucleus, plastid | 27.85 | 29.33 |
| CDY60000 | Canola | nucleus, plastid | 27.85 | 29.33 |
| CDY58140 | Canola | nucleus, plastid | 27.85 | 29.33 |
| CDY11864 | Canola | nucleus, plastid | 27.85 | 29.33 |
| Bra020437.1-P | Field mustard | nucleus, plastid | 27.85 | 29.33 |
| AT5G57520.1 | Thale cress | nucleus, plastid | 27.85 | 29.33 |
| VIT_11s0052g01120.t01 | Wine grape | nucleus | 28.48 | 29.22 |
| Solyc07g006880.1.1 | Tomato | nucleus, plastid | 29.75 | 28.83 |
| KRH19009 | Soybean | nucleus | 29.75 | 28.66 |
| KRH02887 | Soybean | nucleus | 28.48 | 27.78 |
| Os02t0182300-00 | Rice | cytosol, mitochondrion, peroxisome | 27.85 | 22.68 |
| Os12t0581900-01 | Rice | nucleus | 26.58 | 21.54 |
| Os03t0239300-01 | Rice | nucleus | 31.65 | 20.83 |
| Os03t0607700-01 | Rice | nucleus | 31.65 | 20.41 |
| Os07t0593000-01 | Rice | nucleus | 24.05 | 20.21 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:9268017 | ProteinID:BAD09068.1 | ProteinID:BAD10395.1 | ProteinID:BAH94425.1 |
| ProteinID:BAT06642.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 |
| GO:GO:0009838 | GO:GO:0009908 | GO:GO:0060862 | InterPro:IPR013087 | EnsemblPlantsGene:Os08g0555700 | EnsemblPlants:Os08t0555700-00 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF311 | UniProt:Q6Z0T3 | SUPFAM:SSF57667 |
| UniParc:UPI000023ACEE | RefSeq:XP_015648530.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
Zinc finger, C2H2-type domain containing protein. (Os08t0555700-00)
Coordinates
chr8:-:27818486..27818962
Molecular Weight (calculated)
16588.4 Da
IEP (calculated)
9.531
GRAVY (calculated)
-0.414
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEIISARS TTTTTTTAAA GDVNLDLRLV HSTAAGRQHT AATRNPAPPL AAAGDDRAFS CTYCRRRFYS SQALGGHQNA HKLERSLAKR SRELSAGVTT
101: AAAPPPPHPE LGWPYPPQGG AAAAVVSWIA DGGRRYGYRV HAAAAGGDAE DIDLSLKL
101: AAAPPPPHPE LGWPYPPQGG AAAAVVSWIA DGGRRYGYRV HAAAAGGDAE DIDLSLKL
001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
Arabidopsis Description
ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.