Factsheet for Os12t0581900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G078100.1	Wheat	nucleus	77.44	80.32
TraesCS5D01G084600.1	Wheat	nucleus	76.92	79.79
TraesCS5A01G071900.1	Wheat	nucleus	75.38	78.19
HORVU5Hr1G018830.1	Barley	nucleus	76.41	78.01
Zm00001d041332_P001	Maize	nucleus	64.1	59.24
Zm00001d030850_P001	Maize	nucleus	57.95	55.94
Zm00001d013743_P001	Maize	nucleus	56.92	48.9
Zm00001d033363_P001	Maize	nucleus	62.56	46.92
Os03t0607700-01	Rice	nucleus	57.44	45.71
EER91243	Sorghum	nucleus	60.51	44.7
VIT_03s0091g00260.t01	Wine grape	nucleus	37.95	39.15
VIT_07s0129g00670.t01	Wine grape	nucleus	38.46	38.86
Solyc01g107430.2.1	Tomato	nucleus	33.33	37.57
PGSC0003DMT400066536	Potato	nucleus	33.33	37.57
GSMUA_Achr10P...	Banana	nucleus	34.36	36.81
KRH35714	Soybean	nucleus	35.38	36.7
VIT_18s0001g09590.t01	Wine grape	nucleus	35.9	36.27
PGSC0003DMT400059824	Potato	nucleus	31.28	35.47
Os07t0593000-01	Rice	nucleus	33.85	35.11
KRG91058	Soybean	nucleus	34.36	35.08
GSMUA_Achr6P24010_001	Banana	nucleus	31.28	35.06
Solyc10g049870.1.1	Tomato	nucleus	30.77	34.88
KRH58019	Soybean	nucleus	34.36	33.67
KRH57480	Soybean	nucleus	31.79	31.16
KRH04497	Soybean	nucleus	33.33	30.95
Os08t0555700-00	Rice	cytosol, nucleus, plastid	21.54	26.58
Os03t0239300-01	Rice	nucleus	30.77	25.0
Os02t0182300-00	Rice	cytosol, mitochondrion, peroxisome	22.05	22.16

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:4352643	ProteinID:ABA99138.1	EMBL:AK066117	ProteinID:BAF30157.1
ProteinID:BAT17826.1	ProteinID:EAZ21014.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR013087	EnsemblPlantsGene:Os12g0581900	EnsemblPlants:Os12t0581900-01
ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374	PANTHER:PTHR26374:SF309	UniProt:Q2QN25	SUPFAM:SSF57667
UniParc:UPI0000680D54	RefSeq:XP_015620065.1	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:

Description

Zinc finger, C2H2-like domain containing protein. (Os12t0581900-01)

Coordinates

chr12:-:24145596..24146549

Molecular Weight (calculated)

21617.9 Da

IEP (calculated)

5.884

GRAVY (calculated)

-0.823

Length

195 amino acids

Sequence
(BLAST)

001: MEQADESSVN KESSEQQQLT SEQDDDGATW LSLTLATQGS PEEATAEAEE TEAANCSESE APKPSSAPHK VFSCNFCMRK FFSSQALGGH QNAHKRERSA
101: AKRSYHAQRM MMGLPLEAHA AFVHSLRVNQ SSVIQKASQQ AQIRTAPRFH EGSISWPPIA YEEVPNSTWP GSFRLRSQPS DQPSEQSKID LNLRL

Best Arabidopsis Sequence Match ( AT1G24625.1 )
(BLAST)

001: MTESDDASRE TPASRGGEAS SNQDLSKPES NHVSLDLKLN DTFNDDTKST KCEANPRVFS CNYCRRKFYS SQALGGHQNA HKRERTMAKR AMHMGRMFGH
101: HHRPYTYTSS SLGMQAHSGL LHHTLSQPQP LVSRFHHQGY FGNTVPLFFD YDDGGSDFFW PGSFRQVVEE AEAPVVVVAS TESGLDLNSV AANGGVDNNS
201: SKPDLTLRL

Arabidopsis Description

ZFP7Zinc finger protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39266]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.