Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G078100.1 | Wheat | nucleus | 96.81 | 96.81 |
| TraesCS5D01G084600.1 | Wheat | nucleus | 96.28 | 96.28 |
| HORVU5Hr1G018830.1 | Barley | nucleus | 94.68 | 93.19 |
| Os12t0581900-01 | Rice | nucleus | 78.19 | 75.38 |
| Zm00001d041332_P001 | Maize | nucleus | 65.96 | 58.77 |
| Zm00001d030850_P001 | Maize | nucleus | 61.17 | 56.93 |
| Zm00001d013743_P001 | Maize | nucleus | 59.57 | 49.34 |
| EER91243 | Sorghum | nucleus | 64.36 | 45.83 |
| Zm00001d033363_P001 | Maize | nucleus | 62.77 | 45.38 |
| VIT_07s0129g00670.t01 | Wine grape | nucleus | 39.36 | 38.34 |
| VIT_18s0001g09590.t01 | Wine grape | nucleus | 38.83 | 37.82 |
| VIT_03s0091g00260.t01 | Wine grape | nucleus | 37.23 | 37.04 |
| PGSC0003DMT400066536 | Potato | nucleus | 34.04 | 36.99 |
| Solyc01g107430.2.1 | Tomato | nucleus | 34.04 | 36.99 |
| GSMUA_Achr10P... | Banana | nucleus | 35.11 | 36.26 |
| KRH35714 | Soybean | nucleus | 35.64 | 35.64 |
| PGSC0003DMT400059824 | Potato | nucleus | 32.45 | 35.47 |
| Solyc10g049870.1.1 | Tomato | nucleus | 31.91 | 34.88 |
| KRG91058 | Soybean | nucleus | 35.11 | 34.55 |
| GSMUA_Achr6P24010_001 | Banana | nucleus | 31.91 | 34.48 |
| TraesCS2A01G183800.1 | Wheat | nucleus | 31.91 | 34.29 |
| KRH58019 | Soybean | nucleus | 31.38 | 29.65 |
| TraesCS7A01G276700.1 | Wheat | nucleus | 22.87 | 28.86 |
| KRH57480 | Soybean | nucleus | 29.79 | 28.14 |
| KRH04497 | Soybean | nucleus | 30.85 | 27.62 |
| TraesCS5A01G360700.1 | Wheat | nucleus | 22.87 | 27.04 |
| TraesCS6A01G145900.1 | Wheat | nucleus | 25.53 | 25.95 |
| TraesCS5A01G361000.1 | Wheat | nucleus | 20.74 | 24.53 |
| TraesCS5A01G360600.1 | Wheat | nucleus | 22.34 | 24.42 |
| TraesCS4A01G073200.1 | Wheat | nucleus | 29.26 | 22.73 |
| TraesCS3A01G497500.1 | Wheat | nucleus | 23.94 | 17.31 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G071900.1 | EnsemblPlantsGene:TraesCS5A01G071900 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF309 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | MapMan:15.5.15 | : | : |
Description
No Description!
Coordinates
chr5A:+:82306649..82307215
Molecular Weight (calculated)
20838.3 Da
IEP (calculated)
6.784
GRAVY (calculated)
-0.719
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQADEASSV NKGSPERLTI DQDDGASWLS LTVGANESLE TVANCSEPEP DPEPKPSATP HKVFSCNFCM RKFFSSQALG GHQNAHKRER SAAKRSYHAQ
101: RMVMGLPLEA HAAFVQSLRV SQSSVIQKSS QPTQIRTAPR FHEDGMTWAT IPCEEVLNST WPGSFRARTQ PSEQQPSEQS KIDLNLRL
101: RMVMGLPLEA HAAFVQSLRV SQSSVIQKSS QPTQIRTAPR FHEDGMTWAT IPCEEVLNST WPGSFRARTQ PSEQQPSEQS KIDLNLRL
001: MTESDDASRE TPASRGGEAS SNQDLSKPES NHVSLDLKLN DTFNDDTKST KCEANPRVFS CNYCRRKFYS SQALGGHQNA HKRERTMAKR AMHMGRMFGH
101: HHRPYTYTSS SLGMQAHSGL LHHTLSQPQP LVSRFHHQGY FGNTVPLFFD YDDGGSDFFW PGSFRQVVEE AEAPVVVVAS TESGLDLNSV AANGGVDNNS
201: SKPDLTLRL
101: HHRPYTYTSS SLGMQAHSGL LHHTLSQPQP LVSRFHHQGY FGNTVPLFFD YDDGGSDFFW PGSFRQVVEE AEAPVVVVAS TESGLDLNSV AANGGVDNNS
201: SKPDLTLRL
Arabidopsis Description
ZFP7Zinc finger protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39266]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.