Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d033363_P001 | Maize | nucleus | 75.38 | 76.54 |
Zm00001d013743_P001 | Maize | nucleus | 65.53 | 76.21 |
TraesCS5A01G071900.1 | Wheat | nucleus | 45.83 | 64.36 |
TraesCS5B01G078100.1 | Wheat | nucleus | 45.45 | 63.83 |
TraesCS4D01G077000.1 | Wheat | nucleus | 54.55 | 63.72 |
HORVU5Hr1G018830.1 | Barley | nucleus | 45.83 | 63.35 |
TraesCS5D01G084600.1 | Wheat | nucleus | 45.08 | 63.3 |
TraesCS4B01G078400.1 | Wheat | nucleus | 53.79 | 63.11 |
HORVU4Hr1G013330.1 | Barley | nucleus | 53.03 | 63.06 |
Os12t0581900-01 | Rice | nucleus | 44.7 | 60.51 |
Os03t0607700-01 | Rice | nucleus | 50.76 | 54.69 |
VIT_18s0001g09590.t01 | Wine grape | nucleus | 28.79 | 39.38 |
VIT_07s0129g00670.t01 | Wine grape | nucleus | 28.79 | 39.38 |
KRH35714 | Soybean | nucleus | 28.03 | 39.36 |
Solyc01g107430.2.1 | Tomato | nucleus | 25.38 | 38.73 |
KRG91058 | Soybean | nucleus | 27.65 | 38.22 |
PGSC0003DMT400066536 | Potato | nucleus | 25.0 | 38.15 |
VIT_03s0091g00260.t01 | Wine grape | nucleus | 27.27 | 38.1 |
EER97478 | Sorghum | nucleus | 25.38 | 37.64 |
GSMUA_Achr10P... | Banana | nucleus | 25.38 | 36.81 |
GSMUA_Achr6P24010_001 | Banana | nucleus | 24.24 | 36.78 |
PGSC0003DMT400059824 | Potato | nucleus | 23.86 | 36.63 |
Solyc10g049870.1.1 | Tomato | nucleus | 23.48 | 36.05 |
KRH58019 | Soybean | nucleus | 26.52 | 35.18 |
OQU80725 | Sorghum | nucleus | 20.45 | 32.53 |
KRH04497 | Soybean | nucleus | 25.76 | 32.38 |
KRH57480 | Soybean | nucleus | 23.86 | 31.66 |
EER99346 | Sorghum | nucleus | 19.32 | 30.18 |
OQU84499 | Sorghum | nucleus | 21.21 | 28.72 |
EER92577 | Sorghum | cytosol, mitochondrion, nucleus | 24.62 | 28.38 |
EES00097 | Sorghum | nucleus | 20.08 | 17.91 |
Protein Annotations
MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:8064508 | UniProt:C5WT58 | EnsemblPlants:EER91243 | ProteinID:EER91243 |
ProteinID:EER91243.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 |
PANTHER:PTHR26374:SF228 | EnsemblPlantsGene:SORBI_3001G169700 | SUPFAM:SSF57667 | UniParc:UPI0001A8221E | RefSeq:XP_002464245.1 | InterPro:Znf_C2H2_sf |
InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:14154981..14157759
Molecular Weight (calculated)
27525.8 Da
IEP (calculated)
6.862
GRAVY (calculated)
-0.486
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDLLGMEQT DEASSVNEQS AERRQPSVVA GGGAMAWLDL TLAVNASSRD EFPAPDGGDS SSAGSDGEPP PAKPDASASA SPSPPPPANP TPHKVFSCNF
101: CMRKFFSSQA LGGHQNAHKR ERSAAKRSTS AYHHHLHAQQ RMVMAGLPLE AHAALVRAAL RVSPASTVIH KAASASQDLA AARASAAAAA AGAVATSTAP
201: RFHDGDSSNA STAATPWATA LLYEEPVSST WPGSFRMRAQ PEPPSSEQQQ ASEQSKKIDL DLRL
101: CMRKFFSSQA LGGHQNAHKR ERSAAKRSTS AYHHHLHAQQ RMVMAGLPLE AHAALVRAAL RVSPASTVIH KAASASQDLA AARASAAAAA AGAVATSTAP
201: RFHDGDSSNA STAATPWATA LLYEEPVSST WPGSFRMRAQ PEPPSSEQQQ ASEQSKKIDL DLRL
001: MTESDDASRE TPASRGGEAS SNQDLSKPES NHVSLDLKLN DTFNDDTKST KCEANPRVFS CNYCRRKFYS SQALGGHQNA HKRERTMAKR AMHMGRMFGH
101: HHRPYTYTSS SLGMQAHSGL LHHTLSQPQP LVSRFHHQGY FGNTVPLFFD YDDGGSDFFW PGSFRQVVEE AEAPVVVVAS TESGLDLNSV AANGGVDNNS
201: SKPDLTLRL
101: HHRPYTYTSS SLGMQAHSGL LHHTLSQPQP LVSRFHHQGY FGNTVPLFFD YDDGGSDFFW PGSFRQVVEE AEAPVVVVAS TESGLDLNSV AANGGVDNNS
201: SKPDLTLRL
Arabidopsis Description
ZFP7Zinc finger protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39266]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.