Factsheet for TraesCS4D01G077000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G078400.1	Wheat	nucleus	91.15	91.56
HORVU4Hr1G013330.1	Barley	nucleus	85.4	86.94
TraesCS5D01G084600.1	Wheat	nucleus	50.88	61.17
Os03t0607700-01	Rice	nucleus	61.06	56.33
Zm00001d013743_P001	Maize	nucleus	55.75	55.51
EER91243	Sorghum	nucleus	63.72	54.55
Zm00001d033363_P001	Maize	nucleus	59.73	51.92
Zm00001d030850_P001	Maize	nucleus	46.02	51.49
Zm00001d041332_P001	Maize	nucleus	47.35	50.71
VIT_03s0091g00260.t01	Wine grape	nucleus	34.07	40.74
VIT_18s0001g09590.t01	Wine grape	nucleus	34.51	40.41
VIT_07s0129g00670.t01	Wine grape	nucleus	33.63	39.38
KRH35714	Soybean	nucleus	32.74	39.36
Solyc01g107430.2.1	Tomato	nucleus	30.09	39.31
GSMUA_Achr10P...	Banana	nucleus	30.97	38.46
KRG91058	Soybean	nucleus	32.3	38.22
PGSC0003DMT400066536	Potato	nucleus	29.2	38.15
TraesCS2D01G191700.1	Wheat	nucleus	29.65	37.43
GSMUA_Achr6P24010_001	Banana	nucleus	28.76	37.36
PGSC0003DMT400059824	Potato	nucleus	27.43	36.05
Solyc10g049870.1.1	Tomato	nucleus	27.43	36.05
KRH58019	Soybean	nucleus	30.53	34.67
TraesCS7D01G276700.1	Wheat	nucleus	22.57	33.33
KRH04497	Soybean	nucleus	29.65	31.9
KRH57480	Soybean	nucleus	27.88	31.66
TraesCS5D01G369800.1	Wheat	nucleus	22.12	31.65
TraesCS6D01G135200.1	Wheat	nucleus	21.68	28.32
TraesCS5D01G369900.1	Wheat	nucleus	20.8	27.81
TraesCS4D01G230300.1	Wheat	nucleus	25.22	26.15
TraesCS5D01G355400.1	Wheat	nucleus	25.22	23.55
TraesCS5D01G354900.1	Wheat	nucleus	22.12	22.52
TraesCS3D01G505300.1	Wheat	nucleus	23.01	20.16

Protein Annotations

EnsemblPlants:TraesCS4D01G077000.1	EnsemblPlantsGene:TraesCS4D01G077000	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF228	PFscan:PS50157
ScanProsite:PS00028	SEG:seg	SUPFAM:SSF57667	MapMan:15.5.15	:	:

Description

No Description!

Coordinates

chr4D:-:51295941..51296621

Molecular Weight (calculated)

24495.8 Da

IEP (calculated)

7.385

GRAVY (calculated)

-0.654

Length

226 amino acids

Sequence
(BLAST)

001: MQDRDMEQTD EAVSASPARL LTPAGEQQGD AATWLDLTLG VNGSQPAAAE DPSSCSDEEP AAKHRQEQPP PPPPAAAAAP TTPHKVFSCN FCMRKFFSSQ
101: ALGGHQNAHK RERSAAKRSS SLSYHHAHHQ RMVMAGLPLE AHAAIVRALR VNPAGSAVHK PARQEATAPR LHDGVVGPWP PLVYEEVLGS TSWPGSFRMR
201: TQTEPPSSEQ QLLPEQTKKM DLSLRL

Best Arabidopsis Sequence Match ( AT1G24625.1 )
(BLAST)

001: MTESDDASRE TPASRGGEAS SNQDLSKPES NHVSLDLKLN DTFNDDTKST KCEANPRVFS CNYCRRKFYS SQALGGHQNA HKRERTMAKR AMHMGRMFGH
101: HHRPYTYTSS SLGMQAHSGL LHHTLSQPQP LVSRFHHQGY FGNTVPLFFD YDDGGSDFFW PGSFRQVVEE AEAPVVVVAS TESGLDLNSV AANGGVDNNS
201: SKPDLTLRL

Arabidopsis Description

ZFP7Zinc finger protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39266]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.