Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91243 | Sorghum | nucleus | 76.54 | 75.38 |
| Zm00001d013743_P001 | Maize | nucleus | 64.62 | 74.01 |
| TraesCS5D01G084600.1 | Wheat | nucleus | 46.15 | 63.83 |
| TraesCS5B01G078100.1 | Wheat | nucleus | 45.77 | 63.3 |
| HORVU5Hr1G018830.1 | Barley | nucleus | 46.15 | 62.83 |
| TraesCS5A01G071900.1 | Wheat | nucleus | 45.38 | 62.77 |
| Os12t0581900-01 | Rice | nucleus | 46.92 | 62.56 |
| HORVU4Hr1G013330.1 | Barley | nucleus | 51.54 | 60.36 |
| TraesCS4D01G077000.1 | Wheat | nucleus | 51.92 | 59.73 |
| TraesCS4B01G078400.1 | Wheat | nucleus | 50.38 | 58.22 |
| Zm00001d030850_P001 | Maize | nucleus | 41.15 | 52.97 |
| Os03t0607700-01 | Rice | nucleus | 49.62 | 52.65 |
| Zm00001d041332_P001 | Maize | nucleus | 42.69 | 52.61 |
| Zm00001d025350_P001 | Maize | nucleus | 19.62 | 43.59 |
| Zm00001d052006_P001 | Maize | nucleus | 19.23 | 42.73 |
| Zm00001d002745_P001 | Maize | nucleus | 19.23 | 42.73 |
| Zm00001d016069_P001 | Maize | nucleus | 19.23 | 42.73 |
| Zm00001d035257_P001 | Maize | nucleus | 19.23 | 42.73 |
| Zm00001d035262_P001 | Maize | nucleus | 19.23 | 42.73 |
| Zm00001d039773_P001 | Maize | nucleus | 19.23 | 42.73 |
| Zm00001d006367_P001 | Maize | nucleus | 18.85 | 41.88 |
| Zm00001d022022_P001 | Maize | nucleus | 27.69 | 40.45 |
| Zm00001d006754_P001 | Maize | nucleus | 28.08 | 39.67 |
| VIT_07s0129g00670.t01 | Wine grape | nucleus | 28.46 | 38.34 |
| VIT_03s0091g00260.t01 | Wine grape | nucleus | 27.69 | 38.1 |
| Solyc01g107430.2.1 | Tomato | nucleus | 25.0 | 37.57 |
| PGSC0003DMT400066536 | Potato | nucleus | 25.0 | 37.57 |
| VIT_18s0001g09590.t01 | Wine grape | nucleus | 27.69 | 37.31 |
| KRH35714 | Soybean | nucleus | 26.92 | 37.23 |
| GSMUA_Achr6P24010_001 | Banana | nucleus | 24.62 | 36.78 |
| KRG91058 | Soybean | nucleus | 26.54 | 36.13 |
| GSMUA_Achr10P... | Banana | nucleus | 25.0 | 35.71 |
| KRH58019 | Soybean | nucleus | 26.92 | 35.18 |
| PGSC0003DMT400059824 | Potato | nucleus | 23.08 | 34.88 |
| Solyc10g049870.1.1 | Tomato | nucleus | 22.69 | 34.3 |
| KRH04497 | Soybean | nucleus | 26.54 | 32.86 |
| Zm00001d031985_P001 | Maize | nucleus | 20.77 | 32.73 |
| KRH57480 | Soybean | nucleus | 23.46 | 30.65 |
| Zm00001d021386_P001 | Maize | nucleus | 19.62 | 28.81 |
| Zm00001d028371_P001 | Maize | nucleus | 24.23 | 28.77 |
| Zm00001d047968_P001 | Maize | nucleus | 23.08 | 28.3 |
| Zm00001d015525_P001 | Maize | nucleus | 16.54 | 24.57 |
| Zm00001d050143_P001 | Maize | nucleus | 19.62 | 18.02 |
Protein Annotations
| EnsemblPlants:Zm00001d033363_P001 | EnsemblPlants:Zm00001d033363_T001 | EnsemblPlantsGene:Zm00001d033363 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF228 | PFscan:PS50157 |
| ProteinID:ONM07308.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI000221CFAF | UniProt:A0A1D6KXZ0 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
Zinc finger protein 1
Coordinates
chr1:+:260339350..260340132
Molecular Weight (calculated)
27280.8 Da
IEP (calculated)
7.274
GRAVY (calculated)
-0.506
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLERMDETS SVNDQSAERR PTVAGGGGGA MPWLDLTLAV TAPRDEFPAT TDGDSSSAAS DGEPPPKPVP VPSSPPPPPP SAPAPHKVFS CNFCMRKFFS
101: SQALGGHQNA HKRERSAAKR SSAPSPAYQY QYHHLHAAQR MVMAGLPLEA HAALVRAALR VSPASAVIQK GAASQELAAA ARKAAGAGAP GATSTAPRFH
201: DGNSAAATSW APALLYEIEE PVSSTWPGSF RMRTQPEPPS SEEQASASEQ SKKIDLDLRL
101: SQALGGHQNA HKRERSAAKR SSAPSPAYQY QYHHLHAAQR MVMAGLPLEA HAALVRAALR VSPASAVIQK GAASQELAAA ARKAAGAGAP GATSTAPRFH
201: DGNSAAATSW APALLYEIEE PVSSTWPGSF RMRTQPEPPS SEEQASASEQ SKKIDLDLRL
001: MEPSIKGDQE MLKIKKQGHQ DLELGLTLLS RGTATSSELN LIDSFKTSSS STSHHQHQQE QLADPRVFSC NYCQRKFYSS QALGGHQNAH KRERTLAKRG
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
Arabidopsis Description
ZFP1At1g80730 [Source:UniProtKB/TrEMBL;Acc:Q0V814]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.