Factsheet for HORVU4Hr1G013330.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G077000.1	Wheat	nucleus	86.94	85.4
TraesCS4B01G078400.1	Wheat	nucleus	84.68	83.56
HORVU5Hr1G018830.1	Barley	nucleus	50.0	58.12
Zm00001d013743_P001	Maize	nucleus	54.95	53.74
Os03t0607700-01	Rice	nucleus	58.56	53.06
EER91243	Sorghum	nucleus	63.06	53.03
Zm00001d033363_P001	Maize	nucleus	60.36	51.54
Zm00001d030850_P001	Maize	nucleus	44.14	48.51
Zm00001d041332_P001	Maize	nucleus	45.5	47.87
VIT_03s0091g00260.t01	Wine grape	nucleus	33.33	39.15
VIT_18s0001g09590.t01	Wine grape	nucleus	33.78	38.86
VIT_07s0129g00670.t01	Wine grape	nucleus	33.78	38.86
KRH35714	Soybean	nucleus	32.43	38.3
Solyc01g107430.2.1	Tomato	nucleus	29.73	38.15
PGSC0003DMT400066536	Potato	nucleus	29.28	37.57
GSMUA_Achr10P...	Banana	nucleus	30.63	37.36
KRG91058	Soybean	nucleus	31.98	37.17
GSMUA_Achr6P24010_001	Banana	nucleus	28.38	36.21
HORVU2Hr1G034650.1	Barley	nucleus	28.83	35.75
Solyc10g049870.1.1	Tomato	nucleus	27.03	34.88
PGSC0003DMT400059824	Potato	nucleus	26.58	34.3
KRH58019	Soybean	nucleus	29.73	33.17
HORVU5Hr1G088880.1	Barley	nucleus	20.72	31.08
KRH04497	Soybean	nucleus	29.28	30.95
KRH57480	Soybean	nucleus	27.48	30.65
HORVU0Hr1G015760.1	Barley	nucleus	23.87	30.29
HORVU0Hr1G031830.1	Barley	nucleus	19.82	29.73
HORVU4Hr1G064150.1	Barley	plastid	30.63	28.69
HORVU5Hr1G088950.1	Barley	nucleus	21.62	27.91
HORVU0Hr1G008920.1	Barley	mitochondrion	9.01	26.32
HORVU5Hr1G088860.1	Barley	nucleus	22.07	24.38
HORVU7Hr1G058220.1	Barley	plastid	20.72	23.35

Protein Annotations

EMBL:AK367624	EnsemblPlants:HORVU4Hr1G013330.1	EnsemblPlantsGene:HORVU4Hr1G013330	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF228
PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF57667	UniParc:UPI00020072E5	UniProt:F2DUQ6
MapMan:15.5.15	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DUQ6]

Coordinates

chrchr4H:-:46415127..46416650

Molecular Weight (calculated)

24284.7 Da

IEP (calculated)

7.794

GRAVY (calculated)

-0.577

Length

222 amino acids

Sequence
(BLAST)

001: MQDRDIEQME EAVSVSLSPA RLLAAAGEQQ GDASTWLDLT LGVTGSQPAA EDYSSSFSDE EPPAKRTQPH PPPAAAAAPP TPHKVFSCNF CMRKFFSSQA
101: LGGHQNAHKR ERSAAKRSSS LSYHHAHRQR MVMAGLPLEA HAAIVRALGV NQAIHKPVRQ EPTAPRLHDG VVGPWPSLVY EEVLGSTSWP GSFRMRTQTE
201: PPSPDQQLLP EQTKKMDLSL RL

Best Arabidopsis Sequence Match ( AT1G24625.1 )
(BLAST)

001: MTESDDASRE TPASRGGEAS SNQDLSKPES NHVSLDLKLN DTFNDDTKST KCEANPRVFS CNYCRRKFYS SQALGGHQNA HKRERTMAKR AMHMGRMFGH
101: HHRPYTYTSS SLGMQAHSGL LHHTLSQPQP LVSRFHHQGY FGNTVPLFFD YDDGGSDFFW PGSFRQVVEE AEAPVVVVAS TESGLDLNSV AANGGVDNNS
201: SKPDLTLRL

Arabidopsis Description

ZFP7Zinc finger protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39266]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.