Factsheet for HORVU5Hr1G088860.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G369900.1	Wheat	nucleus	73.63	87.57
TraesCS5D01G369800.1	Wheat	nucleus	66.67	84.81
TraesCS5B01G363300.1	Wheat	nucleus	72.14	84.8
TraesCS5A01G360600.1	Wheat	nucleus	71.14	83.14
TraesCS5A01G360700.1	Wheat	nucleus	64.18	81.13
HORVU5Hr1G088880.1	Barley	nucleus	57.21	77.7
HORVU0Hr1G031830.1	Barley	nucleus	49.75	67.57
TraesCS5B01G363200.1	Wheat	mitochondrion	68.66	66.35
HORVU5Hr1G088950.1	Barley	nucleus	50.75	59.3
Zm00001d021386_P001	Maize	nucleus	40.8	46.33
EER99346	Sorghum	nucleus	37.81	44.97
VIT_11s0052g01120.t01	Wine grape	nucleus	25.37	33.12
HORVU7Hr1G058220.1	Barley	plastid	32.34	32.99
PGSC0003DMT400048247	Potato	nucleus, plastid	25.37	32.9
KRH19009	Soybean	nucleus	26.37	32.32
AT5G57520.1	Thale cress	nucleus, plastid	23.38	31.33
Bra006815.1-P	Field mustard	nucleus, plastid	23.38	31.33
Bra020437.1-P	Field mustard	nucleus, plastid	23.38	31.33
CDY11864	Canola	nucleus, plastid	23.38	31.33
CDY58140	Canola	nucleus, plastid	23.38	31.33
CDY60000	Canola	nucleus, plastid	23.38	31.33
Solyc07g006880.1.1	Tomato	nucleus, plastid	25.37	31.29
KRH02887	Soybean	nucleus	24.88	30.86
HORVU2Hr1G034650.1	Barley	nucleus	21.89	24.58
HORVU5Hr1G018830.1	Barley	nucleus	22.89	24.08
HORVU0Hr1G015760.1	Barley	nucleus	20.9	24.0
HORVU4Hr1G013330.1	Barley	nucleus	24.38	22.07
HORVU4Hr1G064150.1	Barley	plastid	24.38	20.68
HORVU0Hr1G008920.1	Barley	mitochondrion	3.48	9.21

Protein Annotations

EnsemblPlants:HORVU5Hr1G088860.1	EnsemblPlantsGene:HORVU5Hr1G088860	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF311	PFscan:PS50157
ScanProsite:PS00028	SEG:seg	SUPFAM:SSF57667	UniParc:UPI000B47AA48	UniProt:A0A287S6Z8	MapMan:15.5.15

Description

No Description!

Coordinates

chrchr5H:-:582701206..582702085

Molecular Weight (calculated)

21055.8 Da

IEP (calculated)

10.805

GRAVY (calculated)

-0.521

Length

201 amino acids

Sequence
(BLAST)

001: HSHHRFLHRS THRRDTRPLP RASRGMQRPA MEGEAAQPQS NQLLLHGVSL DLRLDTATAT HQQGQRGARR PASPAAPPPA AALDNAGREA FSCNYCQRKF
101: FSSQALGGHQ NAHKLERTLA KRSRDVPSAT ASASSSAAAH WLHAGGGELW GYSASGAAPD SATMAPLMGM GMGMGMGWGG TGSTAAAGGE AVAEMDLSLK
201: L

Best Arabidopsis Sequence Match ( AT5G57520.1 )
(BLAST)

001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL

Arabidopsis Description

ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.